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    ERC1 ELKS/RAB6-interacting/CAST family member 1 [ Gallus gallus (chicken) ]

    Gene ID: 418153, updated on 3-Dec-2024

    Summary

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    Official Symbol
    ERC1provided by CGNC
    Official Full Name
    ELKS/RAB6-interacting/CAST family member 1provided by CGNC
    Primary source
    CGNC:9835
    See related
    Ensembl:ENSGALG00010012399
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See ERC1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (60605727..60897504)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (60926975..61219188)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124417239 Neighboring gene uncharacterized LOC121107292 Neighboring gene WNK lysine deficient protein kinase 1 Neighboring gene RAD52 homolog, DNA repair protein Neighboring gene uncharacterized LOC121107293 Neighboring gene Wnt family member 5B Neighboring gene uncharacterized LOC121107459 Neighboring gene F-box and leucine rich repeat protein 14

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of presynaptic active zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in maintenance of presynaptic active zone structure IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuromuscular synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of synaptic plasticity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoskeleton of presynaptic active zone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ELKS/Rab6-interacting/CAST family member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      60605727..60897504
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040650627.2 → XP_040506561.1  ELKS/Rab6-interacting/CAST family member 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5PT87
      Conserved Domains (2) summary
      COG1196
      Location:302 → 1017
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:144 → 422
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    2. XM_046901424.1 → XP_046757380.1  ELKS/Rab6-interacting/CAST family member 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YFI9

    3. XM_015286777.4 → XP_015142263.1  ELKS/Rab6-interacting/CAST family member 1 isoform X4

      UniProtKB/TrEMBL
      A0A1D5PT87, E1BQR7
      Conserved Domains (3) summary
      PRK11091
      Location:811 → 873
      PRK11091; aerobic respiration control sensor protein ArcB; Provisional
      pfam09457
      Location:1069 → 1109
      RBD-FIP; FIP domain
      pfam10174
      Location:155 → 982
      Cast; RIM-binding protein of the cytomatrix active zone

    4. XM_040650632.2 → XP_040506566.1  ELKS/Rab6-interacting/CAST family member 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YFI9
      Conserved Domains (1) summary
      TIGR02168
      Location:203 → 996
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    5. XM_040650626.2 → XP_040506560.1  ELKS/Rab6-interacting/CAST family member 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5PT87
      Conserved Domains (2) summary
      COG1196
      Location:302 → 1017
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:144 → 422
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    6. XM_040650638.2 → XP_040506572.1  ELKS/Rab6-interacting/CAST family member 1 isoform X5

      UniProtKB/TrEMBL
      A0A1D5PT87
      Conserved Domains (1) summary
      COG1196
      Location:265 → 972
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    7. XM_015286761.3 → XP_015142247.1  ELKS/Rab6-interacting/CAST family member 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YFI9
      Conserved Domains (3) summary
      PRK11091
      Location:815 → 877
      PRK11091; aerobic respiration control sensor protein ArcB; Provisional
      pfam09457
      Location:1073 → 1113
      RBD-FIP; FIP domain
      pfam10174
      Location:155 → 986
      Cast; RIM-binding protein of the cytomatrix active zone

    8. XM_040650644.2 → XP_040506578.1  ELKS/Rab6-interacting/CAST family member 1 isoform X7

      UniProtKB/TrEMBL
      A0A1D5PT87
      Conserved Domains (2) summary
      pfam09457
      Location:1029 → 1069
      RBD-FIP; FIP domain
      pfam10174
      Location:155 → 942
      Cast; RIM-binding protein of the cytomatrix active zone

    9. XM_040650636.2 → XP_040506570.1  ELKS/Rab6-interacting/CAST family member 1 isoform X4

      UniProtKB/TrEMBL
      A0A1D5PT87, E1BQR7
      Related
      ENSGALP00010017283.1, ENSGALT00010029699.1
      Conserved Domains (3) summary
      PRK11091
      Location:811 → 873
      PRK11091; aerobic respiration control sensor protein ArcB; Provisional
      pfam09457
      Location:1069 → 1109
      RBD-FIP; FIP domain
      pfam10174
      Location:155 → 982
      Cast; RIM-binding protein of the cytomatrix active zone

    10. XM_040650629.2 → XP_040506563.1  ELKS/Rab6-interacting/CAST family member 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YFI9
      Conserved Domains (1) summary
      TIGR02168
      Location:203 → 996
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    11. XM_040650641.2 → XP_040506575.1  ELKS/Rab6-interacting/CAST family member 1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0YFI9
      Conserved Domains (3) summary
      PRK11091
      Location:783 → 845
      PRK11091; aerobic respiration control sensor protein ArcB; Provisional
      pfam09457
      Location:1041 → 1081
      RBD-FIP; FIP domain
      pfam10174
      Location:155 → 954
      Cast; RIM-binding protein of the cytomatrix active zone

    12. XM_040650649.2 → XP_040506583.1  ELKS/Rab6-interacting/CAST family member 1 isoform X8

      UniProtKB/TrEMBL
      A0A1D5PT87
      Conserved Domains (2) summary
      COG1196
      Location:302 → 1017
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:144 → 422
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    13. XM_040650653.2 → XP_040506587.1  ELKS/Rab6-interacting/CAST family member 1 isoform X10

      UniProtKB/TrEMBL
      A0A1D5PT87
      Conserved Domains (1) summary
      pfam10174
      Location:155 → 942
      Cast; RIM-binding protein of the cytomatrix active zone

    14. XM_040650655.2 → XP_040506589.1  ELKS/Rab6-interacting/CAST family member 1 isoform X11

      UniProtKB/TrEMBL
      A0A1D5PT87
      Related
      ENSGALP00010017282.1, ENSGALT00010029698.1
      Conserved Domains (1) summary
      COG1196
      Location:261 → 938
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]

    15. XM_040650650.2 → XP_040506584.1  ELKS/Rab6-interacting/CAST family member 1 isoform X9

      UniProtKB/TrEMBL
      A0A8V0YFI9
      Related
      ENSGALP00010017284.1, ENSGALT00010029700.1
      Conserved Domains (2) summary
      PRK11091
      Location:787 → 849
      PRK11091; aerobic respiration control sensor protein ArcB; Provisional
      pfam10174
      Location:155 → 958
      Cast; RIM-binding protein of the cytomatrix active zone

    16. XM_040650659.2 → XP_040506593.1  ELKS/Rab6-interacting/CAST family member 1 isoform X12

      UniProtKB/TrEMBL
      A0A1D5PT87
      Conserved Domains (1) summary
      pfam10174
      Location:155 → 914
      Cast; RIM-binding protein of the cytomatrix active zone

    17. XM_046901422.1 → XP_046757378.1  ELKS/Rab6-interacting/CAST family member 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5PT87

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      60926975..61219188
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040659242.2 → XP_040515176.1  ELKS/Rab6-interacting/CAST family member 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5PT87
      Conserved Domains (2) summary
      COG1196
      Location:302 → 1017
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:144 → 422
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    2. XM_040659246.2 → XP_040515180.1  ELKS/Rab6-interacting/CAST family member 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YFI9
      Conserved Domains (3) summary
      PRK11091
      Location:815 → 877
      PRK11091; aerobic respiration control sensor protein ArcB; Provisional
      pfam09457
      Location:1073 → 1113
      RBD-FIP; FIP domain
      pfam10174
      Location:155 → 986
      Cast; RIM-binding protein of the cytomatrix active zone

    3. XM_040659248.2 → XP_040515182.1  ELKS/Rab6-interacting/CAST family member 1 isoform X4

      UniProtKB/TrEMBL
      A0A1D5PT87, E1BQR7
      Conserved Domains (3) summary
      PRK11091
      Location:811 → 873
      PRK11091; aerobic respiration control sensor protein ArcB; Provisional
      pfam09457
      Location:1069 → 1109
      RBD-FIP; FIP domain
      pfam10174
      Location:155 → 982
      Cast; RIM-binding protein of the cytomatrix active zone

    4. XM_040659245.2 → XP_040515179.1  ELKS/Rab6-interacting/CAST family member 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YFI9
      Conserved Domains (1) summary
      TIGR02168
      Location:203 → 996
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    5. XM_040659241.2 → XP_040515175.1  ELKS/Rab6-interacting/CAST family member 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5PT87
      Conserved Domains (2) summary
      COG1196
      Location:302 → 1017
      Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
      TIGR02168
      Location:144 → 422
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    6. XM_046909184.1 → XP_046765140.1  ELKS/Rab6-interacting/CAST family member 1 isoform X5

      UniProtKB/TrEMBL
      A0A1D5PT87

    7. XM_046909183.1 → XP_046765139.1  ELKS/Rab6-interacting/CAST family member 1 isoform X3

      UniProtKB/TrEMBL
      A0A8V0YFI9

    8. XM_046909185.1 → XP_046765141.1  ELKS/Rab6-interacting/CAST family member 1 isoform X7

      UniProtKB/TrEMBL
      A0A1D5PT87

    9. XM_040659247.2 → XP_040515181.1  ELKS/Rab6-interacting/CAST family member 1 isoform X4

      UniProtKB/TrEMBL
      A0A1D5PT87, E1BQR7
      Conserved Domains (3) summary
      PRK11091
      Location:811 → 873
      PRK11091; aerobic respiration control sensor protein ArcB; Provisional
      pfam09457
      Location:1069 → 1109
      RBD-FIP; FIP domain
      pfam10174
      Location:155 → 982
      Cast; RIM-binding protein of the cytomatrix active zone

    10. XM_040659244.2 → XP_040515178.1  ELKS/Rab6-interacting/CAST family member 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YFI9
      Conserved Domains (1) summary
      TIGR02168
      Location:203 → 996
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    11. XM_040659251.2 → XP_040515185.1  ELKS/Rab6-interacting/CAST family member 1 isoform X6

      UniProtKB/TrEMBL
      A0A8V0YFI9
      Conserved Domains (3) summary
      PRK11091
      Location:783 → 845
      PRK11091; aerobic respiration control sensor protein ArcB; Provisional
      pfam09457
      Location:1041 → 1081
      RBD-FIP; FIP domain
      pfam10174
      Location:155 → 954
      Cast; RIM-binding protein of the cytomatrix active zone

    12. XM_046909186.1 → XP_046765142.1  ELKS/Rab6-interacting/CAST family member 1 isoform X8

      UniProtKB/TrEMBL
      A0A1D5PT87

    13. XM_046909187.1 → XP_046765143.1  ELKS/Rab6-interacting/CAST family member 1 isoform X10

      UniProtKB/TrEMBL
      A0A1D5PT87

    14. XM_046909188.1 → XP_046765144.1  ELKS/Rab6-interacting/CAST family member 1 isoform X11

      UniProtKB/TrEMBL
      A0A1D5PT87

    15. XM_040659254.2 → XP_040515188.1  ELKS/Rab6-interacting/CAST family member 1 isoform X9

      UniProtKB/TrEMBL
      A0A8V0YFI9
      Conserved Domains (2) summary
      PRK11091
      Location:787 → 849
      PRK11091; aerobic respiration control sensor protein ArcB; Provisional
      pfam10174
      Location:155 → 958
      Cast; RIM-binding protein of the cytomatrix active zone

    16. XM_040659257.2 → XP_040515191.1  ELKS/Rab6-interacting/CAST family member 1 isoform X12

      UniProtKB/TrEMBL
      A0A1D5PT87
      Conserved Domains (1) summary
      pfam10174
      Location:155 → 914
      Cast; RIM-binding protein of the cytomatrix active zone

    17. XM_046909182.1 → XP_046765138.1  ELKS/Rab6-interacting/CAST family member 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5PT87
    Nucleotide Protein Strain
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