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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_016643.1 RefSeqGene
- Range
-
5040..27690
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001009182.2 → NP_001009182.2 gem-associated protein 2 isoform beta
Status: REVIEWED
- Description
- Transcript Variant: This variant (beta) lacks an in-frame exon, compared to variant alpha. It encodes isoform beta which is shorter than isoform alpha.
- Source sequence(s)
-
AL109628
- Consensus CDS
-
CCDS32068.2
- UniProtKB/TrEMBL
- A0A3B3IU42, A0A8J9FJK1
- Related
- ENSP00000250379.9, ENST00000250379.13
- Conserved Domains (1) summary
-
- pfam04938
Location:34 → 247
- SIP1; Survival motor neuron (SMN) interacting protein 1 (SIP1)
-
NM_001009183.2 → NP_001009183.2 gem-associated protein 2 isoform gamma
Status: REVIEWED
- Description
- Transcript Variant: This variant (gamma) lacks an internal exon, compared to variant alpha. It encodes isoform gamma which is shorter and has a unique C-terminus, compared to isoform alpha.
- Source sequence(s)
-
AL109628
- Consensus CDS
-
CCDS41946.2
- UniProtKB/TrEMBL
- A0A8J9FN78, H0YEL0
- Related
- ENSP00000379548.3, ENST00000396249.7
- Conserved Domains (1) summary
-
- pfam04938
Location:34 → 234
- SIP1; Survival motor neuron (SMN) interacting protein 1 (SIP1)
-
NM_003616.3 → NP_003607.2 gem-associated protein 2 isoform alpha
Status: REVIEWED
- Description
- Transcript Variant: This variant (alpha) represents the longest transcript and encodes the longest isoform (alpha).
- Source sequence(s)
-
AL109628
- Consensus CDS
-
CCDS9669.2
- UniProtKB/TrEMBL
-
A0A3B3IU42
- Related
- ENSP00000308533.7, ENST00000308317.12
- Conserved Domains (1) summary
-
- pfam04938
Location:34 → 262
- SIP1; Survival motor neuron (SMN) interacting protein 1 (SIP1)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000014.9 Reference GRCh38.p14 Primary Assembly
- Range
-
39114323..39136973
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017021709.2 → XP_016877198.2 gem-associated protein 2 isoform X1
- UniProtKB/TrEMBL
-
H0YEL0
-
XM_047431807.1 → XP_047287763.1 gem-associated protein 2 isoform X2
Alternate T2T-CHM13v2.0
Genomic
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NC_060938.1 Alternate T2T-CHM13v2.0
- Range
-
33303000..33325655
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054376816.1 → XP_054232791.1 gem-associated protein 2 isoform X1
- UniProtKB/TrEMBL
-
H0YEL0
-
XM_054376817.1 → XP_054232792.1 gem-associated protein 2 isoform X2