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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001102397.3 → NP_001095867.1 heterogeneous nuclear ribonucleoprotein R isoform 4
See identical proteins and their annotated locations for NP_001095867.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) lacks an alternate exon in the 5' region and uses an alternate in-frame splice site, compared to variant 1. It initiates translation at a downstream in-frame start codon. The encoded isoform (4) is shorter than isoform 1.
- Source sequence(s)
-
AL109936, BC110389, BX647784
- UniProtKB/TrEMBL
- A0A6Q8PEX7, B4DMD1
- Related
- ENSP00000502301.2, ENST00000476451.3
- Conserved Domains (1) summary
-
- TIGR01648
Location:5 → 527
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
-
NM_001102398.3 → NP_001095868.1 heterogeneous nuclear ribonucleoprotein R isoform 1
See identical proteins and their annotated locations for NP_001095868.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AL109936, BC001449, BX647784
- Consensus CDS
-
CCDS44085.1
- UniProtKB/TrEMBL
-
B2R7W4
- Related
- ENSP00000363745.3, ENST00000374616.7
- Conserved Domains (2) summary
-
- TIGR01648
Location:106 → 631
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
- cd21067
Location:27 → 110
- NURR_hnRNPR; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein R (hnRNPR) and similar proteins
-
NM_001102399.3 → NP_001095869.1 heterogeneous nuclear ribonucleoprotein R isoform 3
See identical proteins and their annotated locations for NP_001095869.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) lacks an alternate exon in the 5' region and initiates translation at a downstream in-frame start codon, compared to variant 1. The encoded isoform (3) has a shorter N-terminus than isoform 1.
- Source sequence(s)
-
AL109936, BC110389, BX640912, BX647784
- Consensus CDS
-
CCDS60020.1
- UniProtKB/TrEMBL
-
B4DMD1
- Related
- ENSP00000474437.1, ENST00000478691.5
- Conserved Domains (1) summary
-
- TIGR01648
Location:5 → 530
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
-
NM_001297620.2 → NP_001284549.1 heterogeneous nuclear ribonucleoprotein R isoform 5
See identical proteins and their annotated locations for NP_001284549.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (5, also known as R2) lacks an in-frame exon and uses an alternate in-frame splice site, compared to variant 1. The encoded isoform (5) is shorter than isoform 1.
- Source sequence(s)
-
AK297382, AL109936, BX647784, DA496215
- Consensus CDS
-
CCDS72727.1
- UniProtKB/TrEMBL
-
B4DMB1
- Related
- ENSP00000502509.2, ENST00000463552.6
- Conserved Domains (2) summary
-
- TIGR01648
Location:106 → 590
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
- cd21067
Location:27 → 110
- NURR_hnRNPR; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein R (hnRNPR) and similar proteins
-
NM_001297621.2 → NP_001284550.1 heterogeneous nuclear ribonucleoprotein R isoform 7
See identical proteins and their annotated locations for NP_001284550.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) lacks multiple exons in the 5' region and uses an alternate in-frame splice site, compared to variant 1. It initiates translation at a downstream in-frame start codon. The encoded isoform (7) is shorter than isoform 1.
- Source sequence(s)
-
AK297405, AL109936, AU126696, BX647784, DA496215
- UniProtKB/TrEMBL
-
B4DMD1
- Conserved Domains (1) summary
-
- TIGR01648
Location:5 → 468
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
-
NM_001297622.2 → NP_001284551.1 heterogeneous nuclear ribonucleoprotein R isoform 6
See identical proteins and their annotated locations for NP_001284551.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) lacks multiple exons in the 5' region and uses an alternate in-frame splice site, compared to variant 1. It initiates translation at a downstream in-frame start codon. The encoded isoform (6) is shorter than isoform 1.
- Source sequence(s)
-
AK311519, AL109936, BC110389, BX647784, DA496215
- Consensus CDS
-
CCDS72726.1
- UniProtKB/TrEMBL
- B4DMD1, B4DT28
- Related
- ENSP00000475760.1, ENST00000606561.5
- Conserved Domains (1) summary
-
- TIGR01648
Location:5 → 489
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
-
NM_005826.5 → NP_005817.1 heterogeneous nuclear ribonucleoprotein R isoform 2
See identical proteins and their annotated locations for NP_005817.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2, also known as R1) uses an alternate in-frame splice site, compared to variant 1. The encoded isoform (2) is shorter than isoform 1.
- Source sequence(s)
-
AF000364, AL109936, BX647784, DA496215
- Consensus CDS
-
CCDS232.1
- UniProtKB/Swiss-Prot
- O43390, Q2L7G6, Q5TEH1, Q9BV64, S4R3J4
- UniProtKB/TrEMBL
-
B2R7W4
- Related
- ENSP00000304405.6, ENST00000302271.11
- Conserved Domains (2) summary
-
- TIGR01648
Location:106 → 628
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
- cd21067
Location:27 → 110
- NURR_hnRNPR; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein R (hnRNPR) and similar proteins
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000001.11 Reference GRCh38.p14 Primary Assembly
- Range
-
23304688..23344284 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011540476.4 → XP_011538778.1 heterogeneous nuclear ribonucleoprotein R isoform X14
See identical proteins and their annotated locations for XP_011538778.1
- UniProtKB/TrEMBL
-
B4DMD1
- Conserved Domains (1) summary
-
- TIGR01648
Location:5 → 492
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
-
XM_011540477.4 → XP_011538779.1 heterogeneous nuclear ribonucleoprotein R isoform X15
See identical proteins and their annotated locations for XP_011538779.1
- UniProtKB/TrEMBL
-
B4DMD1
- Conserved Domains (1) summary
-
- TIGR01648
Location:5 → 471
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
-
XM_017000010.3 → XP_016855499.1 heterogeneous nuclear ribonucleoprotein R isoform X13
- UniProtKB/TrEMBL
- A0A6Q8PHG0, B4DMB1
- Related
- ENSP00000502234.2, ENST00000470941.6
- Conserved Domains (2) summary
-
- TIGR01648
Location:106 → 569
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
- cd21067
Location:27 → 110
- NURR_hnRNPR; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein R (hnRNPR) and similar proteins
-
XM_011540474.4 → XP_011538776.1 heterogeneous nuclear ribonucleoprotein R isoform X12
See identical proteins and their annotated locations for XP_011538776.1
- UniProtKB/TrEMBL
-
B4DMB1
- Conserved Domains (2) summary
-
- TIGR01648
Location:106 → 593
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
- cd21067
Location:27 → 110
- NURR_hnRNPR; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein R (hnRNPR) and similar proteins
-
XM_017000009.3 → XP_016855498.1 heterogeneous nuclear ribonucleoprotein R isoform X13
- UniProtKB/TrEMBL
- A0A6Q8PHG0, B4DMB1
- Conserved Domains (2) summary
-
- TIGR01648
Location:106 → 569
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
- cd21067
Location:27 → 110
- NURR_hnRNPR; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein R (hnRNPR) and similar proteins
-
XM_005245711.6 → XP_005245768.1 heterogeneous nuclear ribonucleoprotein R isoform X6
See identical proteins and their annotated locations for XP_005245768.1
- UniProtKB/Swiss-Prot
- O43390, Q2L7G6, Q5TEH1, Q9BV64, S4R3J4
- UniProtKB/TrEMBL
-
B2R7W4
- Related
- ENSP00000363741.1, ENST00000374612.5
- Conserved Domains (2) summary
-
- TIGR01648
Location:106 → 628
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
- cd21067
Location:27 → 110
- NURR_hnRNPR; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein R (hnRNPR) and similar proteins
-
XM_011540471.4 → XP_011538773.1 heterogeneous nuclear ribonucleoprotein R isoform X5
See identical proteins and their annotated locations for XP_011538773.1
- UniProtKB/TrEMBL
-
B2R7W4
- Conserved Domains (2) summary
-
- TIGR01648
Location:106 → 631
- hnRNP-R-Q; heterogeneous nuclear ribonucleoprotein R, Q family
- cd21067
Location:27 → 110
- NURR_hnRNPR; NURR (N-terminal unit for RNA recognition) domain found in heterogeneous nuclear ribonucleoprotein R (hnRNPR) and similar proteins
-
XM_047424931.1 → XP_047280887.1 heterogeneous nuclear ribonucleoprotein R isoform X9
- UniProtKB/TrEMBL
-
B4DMB1
-
XM_047424758.1 → XP_047280714.1 heterogeneous nuclear ribonucleoprotein R isoform X4
- UniProtKB/TrEMBL
-
B2R7W4
-
XM_047424712.1 → XP_047280668.1 heterogeneous nuclear ribonucleoprotein R isoform X2
- UniProtKB/TrEMBL
-
B2R7W4
-
XM_047424890.1 → XP_047280846.1 heterogeneous nuclear ribonucleoprotein R isoform X8
- UniProtKB/TrEMBL
-
B4DMB1
-
XM_047424843.1 → XP_047280799.1 heterogeneous nuclear ribonucleoprotein R isoform X7
- UniProtKB/TrEMBL
-
B4DMB1
-
XM_047424994.1 → XP_047280950.1 heterogeneous nuclear ribonucleoprotein R isoform X11
- UniProtKB/TrEMBL
-
B4DMB1
-
XM_011540472.4 → XP_011538774.2 heterogeneous nuclear ribonucleoprotein R isoform X10
- UniProtKB/TrEMBL
-
B4DMB1
-
XM_047424719.1 → XP_047280675.1 heterogeneous nuclear ribonucleoprotein R isoform X3
- UniProtKB/TrEMBL
-
B2R7W4
-
XM_047424699.1 → XP_047280655.1 heterogeneous nuclear ribonucleoprotein R isoform X1
- UniProtKB/TrEMBL
-
B2R7W4
Reference GRCh38.p14 PATCHES
Genomic
-
NW_014040926.1 Reference GRCh38.p14 PATCHES
- Range
-
74667..114263 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054331911.1 → XP_054187886.1 heterogeneous nuclear ribonucleoprotein R isoform X14
- UniProtKB/TrEMBL
-
B4DMD1
-
XM_054331912.1 → XP_054187887.1 heterogeneous nuclear ribonucleoprotein R isoform X15
- UniProtKB/TrEMBL
-
B4DMD1
-
XM_054331910.1 → XP_054187885.1 heterogeneous nuclear ribonucleoprotein R isoform X13
- UniProtKB/TrEMBL
- A0A6Q8PHG0, B4DMB1
-
XM_054331908.1 → XP_054187883.1 heterogeneous nuclear ribonucleoprotein R isoform X12
- UniProtKB/TrEMBL
-
B4DMB1
-
XM_054331909.1 → XP_054187884.1 heterogeneous nuclear ribonucleoprotein R isoform X13
- UniProtKB/TrEMBL
- A0A6Q8PHG0, B4DMB1
-
XM_054331905.1 → XP_054187880.1 heterogeneous nuclear ribonucleoprotein R isoform X6
- UniProtKB/Swiss-Prot
- O43390, Q2L7G6, Q5TEH1, Q9BV64, S4R3J4
- UniProtKB/TrEMBL
-
B2R7W4
-
XM_054331904.1 → XP_054187879.1 heterogeneous nuclear ribonucleoprotein R isoform X5
- UniProtKB/TrEMBL
-
B2R7W4
-
XM_054331903.1 → XP_054187878.1 heterogeneous nuclear ribonucleoprotein R isoform X4
- UniProtKB/TrEMBL
-
B2R7W4
-
XM_054331902.1 → XP_054187877.1 heterogeneous nuclear ribonucleoprotein R isoform X3
- UniProtKB/TrEMBL
-
B2R7W4
-
XM_054331906.1 → XP_054187881.1 heterogeneous nuclear ribonucleoprotein R isoform X9
- UniProtKB/TrEMBL
-
B4DMB1
-
XM_054331907.1 → XP_054187882.1 heterogeneous nuclear ribonucleoprotein R isoform X16
- UniProtKB/TrEMBL
-
B4DMB1
Alternate T2T-CHM13v2.0
Genomic
-
NC_060925.1 Alternate T2T-CHM13v2.0
- Range
-
23137824..23177454 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054333767.1 → XP_054189742.1 heterogeneous nuclear ribonucleoprotein R isoform X14
- UniProtKB/TrEMBL
-
B4DMD1
-
XM_054333768.1 → XP_054189743.1 heterogeneous nuclear ribonucleoprotein R isoform X15
- UniProtKB/TrEMBL
-
B4DMD1
-
XM_054333766.1 → XP_054189741.1 heterogeneous nuclear ribonucleoprotein R isoform X13
- UniProtKB/TrEMBL
- A0A6Q8PHG0, B4DMB1
-
XM_054333764.1 → XP_054189739.1 heterogeneous nuclear ribonucleoprotein R isoform X12
- UniProtKB/TrEMBL
-
B4DMB1
-
XM_054333765.1 → XP_054189740.1 heterogeneous nuclear ribonucleoprotein R isoform X13
- UniProtKB/TrEMBL
- A0A6Q8PHG0, B4DMB1
-
XM_054333761.1 → XP_054189736.1 heterogeneous nuclear ribonucleoprotein R isoform X6
- UniProtKB/Swiss-Prot
- O43390, Q2L7G6, Q5TEH1, Q9BV64, S4R3J4
- UniProtKB/TrEMBL
-
B2R7W4
-
XM_054333760.1 → XP_054189735.1 heterogeneous nuclear ribonucleoprotein R isoform X5
- UniProtKB/TrEMBL
-
B2R7W4
-
XM_054333759.1 → XP_054189734.1 heterogeneous nuclear ribonucleoprotein R isoform X4
- UniProtKB/TrEMBL
-
B2R7W4
-
XM_054333758.1 → XP_054189733.1 heterogeneous nuclear ribonucleoprotein R isoform X3
- UniProtKB/TrEMBL
-
B2R7W4
-
XM_054333762.1 → XP_054189737.1 heterogeneous nuclear ribonucleoprotein R isoform X9
- UniProtKB/TrEMBL
-
B4DMB1
-
XM_054333763.1 → XP_054189738.1 heterogeneous nuclear ribonucleoprotein R isoform X17
- UniProtKB/TrEMBL
-
B4DMB1