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    LOC423110 USP6 N-terminal like [ Gallus gallus (chicken) ]

    Gene ID: 423110, updated on 17-Aug-2024

    Summary

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    Symbol
    LOC423110provided by CGNC
    Full Name
    USP6 N-terminal likeprovided by CGNC
    Primary source
    CGNC:5064
    See related
    Ensembl:ENSGALG00010025600
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
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    Genomic context

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    See LOC423110 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (15642489..15708765, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (15616808..15683101, complement)

    Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 56 Neighboring gene HRas proto-oncogene, GTPase Neighboring gene transfer RNA alanine (anticodon AGC) Neighboring gene ribonuclease/angiogenin inhibitor 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    General protein information

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    Preferred Names
    USP6 N-terminal-like protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      15642489..15708765 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015286812.4 → XP_015142298.3  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Related
      ENSGALP00010038631.1, ENSGALT00010062471.1
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    2. XM_015286811.4 → XP_015142297.3  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    3. XM_046942301.1 → XP_046798257.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    4. XM_040701704.2 → XP_040557638.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    5. XM_046942303.1 → XP_046798259.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    6. XM_046942305.1 → XP_046798261.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    7. XM_046942304.1 → XP_046798260.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    8. XM_046942308.1 → XP_046798264.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    9. XM_046942306.1 → XP_046798262.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    10. XM_046942311.1 → XP_046798267.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    11. XM_046942310.1 → XP_046798266.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    12. XM_046942309.1 → XP_046798265.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    13. XM_040701707.2 → XP_040557641.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    14. XM_040701700.2 → XP_040557634.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    15. XM_040701701.2 → XP_040557635.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    16. XM_015286818.4 → XP_015142304.3  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    17. XM_015286817.4 → XP_015142303.3  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    18. XM_040701705.2 → XP_040557639.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    19. XM_046942316.1 → XP_046798272.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    20. XM_046942317.1 → XP_046798273.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    21. XM_046942312.1 → XP_046798268.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    22. XM_046942319.1 → XP_046798275.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    23. XM_046942313.1 → XP_046798269.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    24. XM_046942314.1 → XP_046798270.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    25. XM_040701699.2 → XP_040557633.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    26. XM_040701708.2 → XP_040557642.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    27. XM_046942318.1 → XP_046798274.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    28. XM_046942321.1 → XP_046798277.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    29. XM_046942320.1 → XP_046798276.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    30. XM_040701709.1 → XP_040557643.1  USP6 N-terminal-like protein isoform X2

      Conserved Domains (2) summary
      PHA03307
      Location:228 → 427
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam00566
      Location:8 → 166
      RabGAP-TBC; Rab-GTPase-TBC domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      15616808..15683101 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040673127.2 → XP_040529061.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    2. XM_040673117.2 → XP_040529051.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    3. XM_046919179.1 → XP_046775135.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    4. XM_046919182.1 → XP_046775138.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    5. XM_046919180.1 → XP_046775136.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    6. XM_046919181.1 → XP_046775137.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    7. XM_040673128.2 → XP_040529062.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    8. XM_040673119.2 → XP_040529053.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    9. XM_040673120.2 → XP_040529054.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    10. XM_040673129.2 → XP_040529063.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    11. XM_040673125.2 → XP_040529059.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    12. XM_040673122.2 → XP_040529056.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    13. XM_046919184.1 → XP_046775140.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    14. XM_040673126.2 → XP_040529060.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    15. XM_040673130.2 → XP_040529064.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2
      Conserved Domains (2) summary
      smart00164
      Location:96 → 302
      TBC; Domain in Tre-2, BUB2p, and Cdc16p. Probable Rab-GAPs
      PHA03307
      Location:356 → 555
      PHA03307; transcriptional regulator ICP4; Provisional

    16. XM_046919183.1 → XP_046775139.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    17. XM_046919186.1 → XP_046775142.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    18. XM_046919185.1 → XP_046775141.1  USP6 N-terminal-like protein isoform X1

      UniProtKB/TrEMBL
      A0A8V1A3N2

    19. XM_040673131.1 → XP_040529065.1  USP6 N-terminal-like protein isoform X2

      Conserved Domains (2) summary
      PHA03307
      Location:228 → 427
      PHA03307; transcriptional regulator ICP4; Provisional
      pfam00566
      Location:8 → 166
      RabGAP-TBC; Rab-GTPase-TBC domain
    Nucleotide Protein Strain
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