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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001300910.2 → NP_001287839.1 rho GTPase-activating protein SYDE1 isoform 2
See identical proteins and their annotated locations for NP_001287839.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. It encodes isoform 2, which is shorter than isoform 1.
- Source sequence(s)
-
AC004794
- Consensus CDS
-
CCDS74299.1
- UniProtKB/TrEMBL
-
B2RD93
- Related
- ENSP00000470733.1, ENST00000600440.5
- Conserved Domains (1) summary
-
- cl02570
Location:329 → 534
- RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...
-
NM_033025.6 → NP_149014.3 rho GTPase-activating protein SYDE1 isoform 1
See identical proteins and their annotated locations for NP_149014.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AC004794
- Consensus CDS
-
CCDS12324.1
- UniProtKB/Swiss-Prot
- Q6ZW31, Q7L2I8, Q8N6J2, Q9H8K4
- UniProtKB/TrEMBL
-
A0A2X0SFL9
- Related
- ENSP00000341489.1, ENST00000342784.7
- Conserved Domains (1) summary
-
- cl02570
Location:396 → 601
- RhoGAP; RhoGAP: GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000019.10 Reference GRCh38.p14 Primary Assembly
- Range
-
15107401..15114974
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047439579.1 → XP_047295535.1 rho GTPase-activating protein SYDE1 isoform X1
- UniProtKB/TrEMBL
-
A0A2X0SFL9
-
XM_047439580.1 → XP_047295536.1 rho GTPase-activating protein SYDE1 isoform X2
-
XM_024451750.2 → XP_024307518.1 rho GTPase-activating protein SYDE1 isoform X3
- Conserved Domains (1) summary
-
- cl02570
Location:396 → 473
- RhoGAP; GTPase-activator protein (GAP) for Rho-like GTPases; GAPs towards Rho/Rac/Cdc42-like small GTPases. Small GTPases (G proteins) cluster into distinct families, and all act as molecular switches, active in their GTP-bound form but inactive when bound to ...
-
XM_047439581.1 → XP_047295537.1 rho GTPase-activating protein SYDE1 isoform X4
Alternate T2T-CHM13v2.0
Genomic
-
NC_060943.1 Alternate T2T-CHM13v2.0
- Range
-
15232344..15239918
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054322456.1 → XP_054178431.1 rho GTPase-activating protein SYDE1 isoform X1
- UniProtKB/TrEMBL
-
A0A2X0SFL9
-
XM_054322457.1 → XP_054178432.1 rho GTPase-activating protein SYDE1 isoform X2
-
XM_054322458.1 → XP_054178433.1 rho GTPase-activating protein SYDE1 isoform X3
-
XM_054322459.1 → XP_054178434.1 rho GTPase-activating protein SYDE1 isoform X4