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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001080814.2 → NP_001074283.2 protocadherin Fat 3 isoform 2 precursor
Status: VALIDATED
- Source sequence(s)
-
AC154406, AC154741, AC159817, AC161370, AC162903
- Consensus CDS
-
CCDS40539.2
- UniProtKB/Swiss-Prot
- Q08ED4, Q8BNA6
- UniProtKB/TrEMBL
-
E9QK16
- Related
- ENSMUSP00000080808.6, ENSMUST00000082170.6
- Conserved Domains (4) summary
-
- cd11304
Location:1048 → 1143
- Cadherin_repeat; Cadherin tandem repeat domain
- smart00112
Location:285 → 372
- CA; Cadherin repeats
- cd00054
Location:4097 → 4132
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- pfam02210
Location:3864 → 3992
- Laminin_G_2; Laminin G domain
-
NM_001413471.1 → NP_001400400.1 protocadherin Fat 3 isoform 1 precursor
Status: VALIDATED
- Source sequence(s)
-
AC154406, AC154741, AC159817, AC161370, AC162903
- UniProtKB/TrEMBL
-
E9QK16
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000075.7 Reference GRCm39 C57BL/6J
- Range
-
15821485..16413981 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011242542.4 → XP_011240844.1 protocadherin Fat 3 isoform X5
- UniProtKB/TrEMBL
-
E9QK16
- Conserved Domains (4) summary
-
- cd11304
Location:1049 → 1144
- Cadherin_repeat; Cadherin tandem repeat domain
- smart00112
Location:286 → 373
- CA; Cadherin repeats
- cd00054
Location:4121 → 4156
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- pfam02210
Location:3888 → 4014
- Laminin_G_2; Laminin G domain
-
XM_011242541.4 → XP_011240843.1 protocadherin Fat 3 isoform X3
- UniProtKB/TrEMBL
-
E9QK16
- Conserved Domains (4) summary
-
- cd11304
Location:1049 → 1144
- Cadherin_repeat; Cadherin tandem repeat domain
- smart00112
Location:286 → 373
- CA; Cadherin repeats
- cd00054
Location:4121 → 4156
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- pfam02210
Location:3888 → 4014
- Laminin_G_2; Laminin G domain
-
XM_017313398.3 → XP_017168887.1 protocadherin Fat 3 isoform X2
- UniProtKB/TrEMBL
-
E9QK16
- Conserved Domains (4) summary
-
- cd11304
Location:1049 → 1144
- Cadherin_repeat; Cadherin tandem repeat domain
- smart00112
Location:286 → 373
- CA; Cadherin repeats
- cd00054
Location:4121 → 4156
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- pfam02210
Location:3888 → 4014
- Laminin_G_2; Laminin G domain
-
XM_011242543.4 → XP_011240845.1 protocadherin Fat 3 isoform X1
- UniProtKB/TrEMBL
-
E9QK16
- Conserved Domains (4) summary
-
- cd11304
Location:1049 → 1144
- Cadherin_repeat; Cadherin tandem repeat domain
- smart00112
Location:286 → 373
- CA; Cadherin repeats
- cd00054
Location:4121 → 4156
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- pfam02210
Location:3888 → 4014
- Laminin_G_2; Laminin G domain
-
XM_030244399.2 → XP_030100259.1 protocadherin Fat 3 isoform X6
- Conserved Domains (3) summary
-
- cd11304
Location:2107 → 2203
- Cadherin_repeat; Cadherin tandem repeat domain
- cd00054
Location:2964 → 2999
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- pfam02210
Location:2731 → 2857
- Laminin_G_2; Laminin G domain
-
XM_036155026.1 → XP_036010919.1 protocadherin Fat 3 isoform X7
- Conserved Domains (2) summary
-
- cd11304
Location:1049 → 1144
- Cadherin_repeat; Cadherin tandem repeat domain
- smart00112
Location:286 → 373
- CA; Cadherin repeats
-
XM_036155027.1 → XP_036010920.1 protocadherin Fat 3 isoform X8
- Conserved Domains (2) summary
-
- cd11304
Location:1049 → 1144
- Cadherin_repeat; Cadherin tandem repeat domain
- smart00112
Location:286 → 373
- CA; Cadherin repeats