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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001256586.1 → NP_001243515.1 centromere protein F
Status: VALIDATED
- Source sequence(s)
-
AAFC03017426, AAFC03031658, AAFC03031660
- UniProtKB/TrEMBL
-
A0AAA9SYD6
- Conserved Domains (8) summary
-
- COG1196
Location:407 → 1163
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG1340
Location:2543 → 2817
- COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
- COG1579
Location:2422 → 2564
- COG1579; Predicted nucleic acid-binding protein, contains Zn-ribbon domain [General function prediction only]
- pfam07851
Location:1961 → 2102
- TMPIT; TMPIT-like protein
- pfam10473
Location:2276 → 2414
- CENP-F_leu_zip; Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
- pfam10481
Location:1 → 307
- CENP-F_N; Cenp-F N-terminal domain
- pfam10490
Location:2932 → 2978
- CENP-F_C_Rb_bdg; Rb-binding domain of kinetochore protein Cenp-F/LEK1
- pfam16046
Location:2168 → 2238
- FAM76; FAM76 protein
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference ARS-UCD2.0 Primary Assembly
Genomic
-
NC_037343.1 Reference ARS-UCD2.0 Primary Assembly
- Range
-
68929293..68991898 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005217369.5 → XP_005217426.1 centromere protein F isoform X1
- UniProtKB/TrEMBL
- A0AAA9SYD6, F1N1F8
- Related
- ENSBTAP00000033816.5, ENSBTAT00000033913.6
- Conserved Domains (7) summary
-
- COG1196
Location:407 → 1163
- Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
- COG1340
Location:2723 → 2997
- COG1340; Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]
- pfam07851
Location:1961 → 2102
- TMPIT; TMPIT-like protein
- pfam10473
Location:2276 → 2415
- CENP-F_leu_zip; Leucine-rich repeats of kinetochore protein Cenp-F/LEK1
- pfam10481
Location:1 → 307
- CENP-F_N; Cenp-F N-terminal domain
- pfam10490
Location:3112 → 3158
- CENP-F_C_Rb_bdg; Rb-binding domain of kinetochore protein Cenp-F/LEK1
- pfam16046
Location:2168 → 2238
- FAM76; FAM76 protein