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    CORO1A coronin 1A [ Bos taurus (domestic cattle) ]

    Gene ID: 282196, updated on 27-Dec-2024

    Summary

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    Official Symbol
    CORO1Aprovided by VGNC
    Official Full Name
    coronin 1Aprovided by VGNC
    Primary source
    VGNC:VGNC:27620
    See related
    BGD:BT28704; Ensembl:ENSBTAG00000008631
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See CORO1A in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (26134791..26140217, complement)

    Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1 Neighboring gene bolA family member 2B Neighboring gene SLX1 homolog A, structure-specific endonuclease subunit Neighboring gene mitogen-activated protein kinase 3 Neighboring gene glycerophosphodiester phosphodiesterase domain containing 3 Neighboring gene yippee like 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Molecular cloning of a novel actin-binding protein, p57, with a WD repeat and a leucine zipper motif. Suzuki K, et al. FEBS Lett, 1995 May 15. PMID 7758584
    2. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    3. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    4. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    5. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    coronin-1A
    Names
    TACO
    clipin-A
    coronin, actin binding protein, 1A
    coronin-like protein A
    coronin-like protein p57
    tryptophan aspartate-containing coat protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_174521.2 → NP_776946.1  coronin-1A

      See identical proteins and their annotated locations for NP_776946.1

      Status: PROVISIONAL

      Source sequence(s)
      D44496
      UniProtKB/Swiss-Prot
      Q3SZF9, Q92176
      UniProtKB/TrEMBL
      A0AAF6YSE8
      Related
      ENSBTAP00000051462.1, ENSBTAT00000051969.2
      Conserved Domains (6) summary
      PTZ00421
      Location:9 → 461
      PTZ00421; coronin; Provisional
      pfam08953
      Location:7 → 64
      DUF1899; Domain of unknown function (DUF1899)
      pfam08954
      Location:410 → 461
      Trimer_CC; Trimerization motif
      pfam16300
      Location:345 → 387
      WD40_4; Type of WD40 repeat
      sd00039
      Location:37 → 79
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:78 → 302
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      26134791..26140217 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005224831.5 → XP_005224888.1  coronin-1A isoform X1

      See identical proteins and their annotated locations for XP_005224888.1

      UniProtKB/Swiss-Prot
      Q3SZF9, Q92176
      UniProtKB/TrEMBL
      A0AAF6YSE8
      Conserved Domains (6) summary
      PTZ00421
      Location:9 → 461
      PTZ00421; coronin; Provisional
      pfam08953
      Location:7 → 64
      DUF1899; Domain of unknown function (DUF1899)
      pfam08954
      Location:410 → 461
      Trimer_CC; Trimerization motif
      pfam16300
      Location:345 → 387
      WD40_4; Type of WD40 repeat
      sd00039
      Location:37 → 79
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:78 → 302
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    2. XM_005224833.5 → XP_005224890.1  coronin-1A isoform X1

      See identical proteins and their annotated locations for XP_005224890.1

      UniProtKB/Swiss-Prot
      Q3SZF9, Q92176
      UniProtKB/TrEMBL
      A0AAF6YSE8
      Conserved Domains (6) summary
      PTZ00421
      Location:9 → 461
      PTZ00421; coronin; Provisional
      pfam08953
      Location:7 → 64
      DUF1899; Domain of unknown function (DUF1899)
      pfam08954
      Location:410 → 461
      Trimer_CC; Trimerization motif
      pfam16300
      Location:345 → 387
      WD40_4; Type of WD40 repeat
      sd00039
      Location:37 → 79
      7WD40; WD40 repeat [structural motif]
      cl02567
      Location:78 → 302
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q92176.3 GenPept UniProtKB/Swiss-Prot:Q92176

    Gene LinkOut

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    Research Materials