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    MYT1 myelin transcription factor 1 [ Gallus gallus (chicken) ]

    Gene ID: 419249, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MYT1provided by CGNC
    Official Full Name
    myelin transcription factor 1provided by CGNC
    Primary source
    CGNC:4432
    See related
    Ensembl:ENSGALG00010023242
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    cMYT1
    Orthologs
    human mouse all
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    Genomic context

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    See MYT1 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 20 NC_052551.1 (9442897..9499310, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 20 NC_052592.1 (9225058..9281456, complement)

    Chromosome 20 - NC_052551.1Genomic Context describing neighboring genes Neighboring gene peroxidasin like Neighboring gene protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 Neighboring gene uncharacterized LOC419250 Neighboring gene neuropeptides B and W receptor 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The fringe molecules induce endocrine differentiation in embryonic endoderm by activating cMyt1/cMyt3. Xu Y, et al. Dev Biol, 2006 Sep 15. PMID 16920096
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myelin transcription factor 1

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052551.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      9442897..9499310 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015296628.4 → XP_015152114.1  myelin transcription factor 1 isoform X4

      Conserved Domains (3) summary
      PLN02713
      Location:487 → 532
      PLN02713; Probable pectinesterase/pectinesterase inhibitor
      pfam01530
      Location:865 → 893
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:555 → 813
      MYT1; Myelin transcription factor 1

    2. XM_025142351.3 → XP_024998119.1  myelin transcription factor 1 isoform X6

      Conserved Domains (3) summary
      PLN02713
      Location:527 → 572
      PLN02713; Probable pectinesterase/pectinesterase inhibitor
      pfam01530
      Location:855 → 883
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:595 → 826
      MYT1; Myelin transcription factor 1

    3. XM_015296627.4 → XP_015152113.1  myelin transcription factor 1 isoform X3

      Conserved Domains (3) summary
      PLN02713
      Location:527 → 572
      PLN02713; Probable pectinesterase/pectinesterase inhibitor
      pfam01530
      Location:878 → 906
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:595 → 826
      MYT1; Myelin transcription factor 1

    4. XM_015296626.4 → XP_015152112.1  myelin transcription factor 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZZS8
      Related
      ENSGALP00010034414.1, ENSGALT00010056672.1
      Conserved Domains (3) summary
      PLN02713
      Location:527 → 572
      PLN02713; Probable pectinesterase/pectinesterase inhibitor
      pfam01530
      Location:882 → 910
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:595 → 853
      MYT1; Myelin transcription factor 1

    5. XM_015296625.4 → XP_015152111.1  myelin transcription factor 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZM15
      Related
      ENSGALP00010034418.1, ENSGALT00010056676.1
      Conserved Domains (3) summary
      PLN02713
      Location:527 → 572
      PLN02713; Probable pectinesterase/pectinesterase inhibitor
      pfam01530
      Location:905 → 933
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:595 → 853
      MYT1; Myelin transcription factor 1

    6. XM_040650958.2 → XP_040506892.1  myelin transcription factor 1 isoform X7

      Conserved Domains (1) summary
      PLN02713
      Location:485 → 530
      PLN02713; Probable pectinesterase/pectinesterase inhibitor

    7. XM_015296630.4 → XP_015152116.1  myelin transcription factor 1 isoform X5

      UniProtKB/TrEMBL
      A0A1D5PN28
      Conserved Domains (3) summary
      PLN02713
      Location:485 → 530
      PLN02713; Probable pectinesterase/pectinesterase inhibitor
      pfam01530
      Location:863 → 891
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:553 → 811
      MYT1; Myelin transcription factor 1

    8. XM_015296629.4 → XP_015152115.1  myelin transcription factor 1 isoform X5

      UniProtKB/TrEMBL
      A0A1D5PN28
      Conserved Domains (3) summary
      PLN02713
      Location:485 → 530
      PLN02713; Probable pectinesterase/pectinesterase inhibitor
      pfam01530
      Location:863 → 891
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:553 → 811
      MYT1; Myelin transcription factor 1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052592.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      9225058..9281456 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040688121.2 → XP_040544055.1  myelin transcription factor 1 isoform X4

      Conserved Domains (3) summary
      PLN02713
      Location:487 → 532
      PLN02713; Probable pectinesterase/pectinesterase inhibitor
      pfam01530
      Location:865 → 893
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:555 → 813
      MYT1; Myelin transcription factor 1

    2. XM_040688124.2 → XP_040544058.1  myelin transcription factor 1 isoform X6

      Conserved Domains (3) summary
      PLN02713
      Location:527 → 572
      PLN02713; Probable pectinesterase/pectinesterase inhibitor
      pfam01530
      Location:855 → 883
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:595 → 826
      MYT1; Myelin transcription factor 1

    3. XM_040688120.2 → XP_040544054.1  myelin transcription factor 1 isoform X3

      Conserved Domains (3) summary
      PLN02713
      Location:527 → 572
      PLN02713; Probable pectinesterase/pectinesterase inhibitor
      pfam01530
      Location:878 → 906
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:595 → 826
      MYT1; Myelin transcription factor 1

    4. XM_040688119.2 → XP_040544053.1  myelin transcription factor 1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0ZZS8
      Conserved Domains (3) summary
      PLN02713
      Location:527 → 572
      PLN02713; Probable pectinesterase/pectinesterase inhibitor
      pfam01530
      Location:882 → 910
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:595 → 853
      MYT1; Myelin transcription factor 1

    5. XM_040688118.2 → XP_040544052.1  myelin transcription factor 1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZM15
      Conserved Domains (3) summary
      PLN02713
      Location:527 → 572
      PLN02713; Probable pectinesterase/pectinesterase inhibitor
      pfam01530
      Location:905 → 933
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:595 → 853
      MYT1; Myelin transcription factor 1

    6. XM_040688125.2 → XP_040544059.1  myelin transcription factor 1 isoform X7

      Conserved Domains (1) summary
      PLN02713
      Location:485 → 530
      PLN02713; Probable pectinesterase/pectinesterase inhibitor

    7. XM_040688122.2 → XP_040544056.1  myelin transcription factor 1 isoform X5

      Conserved Domains (3) summary
      PLN02713
      Location:485 → 530
      PLN02713; Probable pectinesterase/pectinesterase inhibitor
      pfam01530
      Location:863 → 891
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:553 → 811
      MYT1; Myelin transcription factor 1

    8. XM_040688123.2 → XP_040544057.1  myelin transcription factor 1 isoform X5

      Conserved Domains (3) summary
      PLN02713
      Location:485 → 530
      PLN02713; Probable pectinesterase/pectinesterase inhibitor
      pfam01530
      Location:863 → 891
      zf-C2HC; Zinc finger, C2HC type
      pfam08474
      Location:553 → 811
      MYT1; Myelin transcription factor 1
    Nucleotide Protein Strain
    Heading Accession and Version

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