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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001163348.1 → NP_001156820.1 netrin-G1 isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (b) lacks an alternate in-frame exon compared to variant a. The resulting isoform (b) has the same N- and C-termini but is shorter compared to isoform a.
- Source sequence(s)
-
AB038666, AB038667, AK034465, BB621591, BC079881
- Consensus CDS
-
CCDS59652.1
- UniProtKB/TrEMBL
-
F8WJ48
- Related
- ENSMUSP00000120688.3, ENSMUST00000138344.9
- Conserved Domains (3) summary
-
- smart00180
Location:364 → 411
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:296 → 342
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00055
Location:71 → 295
- Laminin_N; Laminin N-terminal (Domain VI)
-
NM_001163349.1 → NP_001156821.1 netrin-G1 isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (c) lacks two alternate in-frame exons compared to variant a. The resulting isoform (c) has the same N- and C-termini but is shorter compared to isoform a.
- Source sequence(s)
-
AB038665, AB038667, AK034465, BB621591, BC079881
- Consensus CDS
-
CCDS59651.1
- UniProtKB/TrEMBL
-
F8WJ50
- Related
- ENSMUSP00000117371.3, ENSMUST00000133268.9
- Conserved Domains (3) summary
-
- cd00054
Location:373 → 397
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:296 → 342
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00055
Location:71 → 295
- Laminin_N; Laminin N-terminal (Domain VI)
-
NM_001163350.1 → NP_001156822.1 netrin-G1 isoform d
Status: VALIDATED
- Description
- Transcript Variant: This variant (d) lacks two alternate in-frame exons and contains two other alternate in-frame exons compared to variant a. The resulting isoform (d) has the same N- and C-termini but is shorter compared to isoform a.
- Source sequence(s)
-
AB038664, AB038667, AK034465, BB621591, BC079881
- Consensus CDS
-
CCDS59654.1
- UniProtKB/TrEMBL
-
F8WJ50
- Related
- ENSMUSP00000116213.3, ENSMUST00000138953.9
- Conserved Domains (3) summary
-
- cd00054
Location:415 → 439
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:296 → 342
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00055
Location:71 → 295
- Laminin_N; Laminin N-terminal (Domain VI)
-
NM_030699.2 → NP_109624.1 netrin-G1 isoform a precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (a) represents the longest transcript and encodes the longest isoform (a).
- Source sequence(s)
-
AB038667, AK034465, BB621591
- Consensus CDS
-
CCDS38604.1
- UniProtKB/Swiss-Prot
- Q68FE5, Q69ZU3, Q8R4F3, Q8R4F4, Q8R4F5, Q8R4F6, Q8R4F7, Q8R4F8, Q8R4F9, Q8R4G0, Q9ESR3, Q9ESR4, Q9ESR5, Q9ESR6, Q9ESR7, Q9ESR8
- UniProtKB/TrEMBL
-
F8WJ48
- Related
- ENSMUSP00000072397.6, ENSMUST00000072596.12
- Conserved Domains (3) summary
-
- smart00180
Location:420 → 467
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:296 → 342
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00055
Location:71 → 295
- Laminin_N; Laminin N-terminal (Domain VI)
-
NM_133488.1 → NP_597995.1 netrin-G1 isoform e precursor
Status: VALIDATED
- Description
- Transcript Variant: This variant (e) lacks two alternate in-frame exons and contains another alternate in-frame exon compared to variant a. The resulting isoform (e) has the same N- and C-termini but is shorter compared to isoform a.
- Source sequence(s)
-
AB038663, AB038667, AK034465, BB621591, BC079881
- Consensus CDS
-
CCDS59653.1
- UniProtKB/TrEMBL
-
F8WJ50
- Related
- ENSMUSP00000119534.3, ENSMUST00000156177.9
- Conserved Domains (3) summary
-
- cd00054
Location:395 → 419
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:296 → 342
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00055
Location:71 → 295
- Laminin_N; Laminin N-terminal (Domain VI)
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000069.7 Reference GRCm39 C57BL/6J
- Range
-
109687366..110057291 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011240295.4 → XP_011238597.1 netrin-G1 isoform X5
- UniProtKB/TrEMBL
-
F8WJ48
- Related
- ENSMUSP00000118800.3, ENSMUST00000131027.9
- Conserved Domains (2) summary
-
- cd00055
Location:296 → 342
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00055
Location:71 → 295
- Laminin_N; Laminin N-terminal (Domain VI)
-
XM_011240294.4 → XP_011238596.1 netrin-G1 isoform X4
- UniProtKB/TrEMBL
-
F8WJ48
- Conserved Domains (3) summary
-
- smart00180
Location:386 → 433
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:296 → 342
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00055
Location:71 → 295
- Laminin_N; Laminin N-terminal (Domain VI)
-
XM_011240293.4 → XP_011238595.1 netrin-G1 isoform X3
- UniProtKB/TrEMBL
-
F8WJ50
- Conserved Domains (3) summary
-
- smart00180
Location:406 → 453
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:296 → 342
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00055
Location:71 → 295
- Laminin_N; Laminin N-terminal (Domain VI)
-
XM_011240292.4 → XP_011238594.1 netrin-G1 isoform X2
- UniProtKB/TrEMBL
-
F8WJ50
- Conserved Domains (3) summary
-
- cd00054
Location:471 → 495
- EGF_CA; Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins. Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the ...
- cd00055
Location:296 → 342
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00055
Location:71 → 295
- Laminin_N; Laminin N-terminal (Domain VI)
-
XM_011240291.4 → XP_011238593.1 netrin-G1 isoform X1
- UniProtKB/TrEMBL
-
F8WJ48
- Conserved Domains (3) summary
-
- smart00180
Location:462 → 509
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:296 → 342
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00055
Location:71 → 295
- Laminin_N; Laminin N-terminal (Domain VI)
-
XM_006502355.5 → XP_006502418.1 netrin-G1 isoform X1
- UniProtKB/TrEMBL
-
F8WJ48
- Conserved Domains (3) summary
-
- smart00180
Location:462 → 509
- EGF_Lam; Laminin-type epidermal growth factor-like domai
- cd00055
Location:296 → 342
- EGF_Lam; Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in ...
- pfam00055
Location:71 → 295
- Laminin_N; Laminin N-terminal (Domain VI)
RNA
-
XR_001783784.3 RNA Sequence
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001163351.1: Suppressed sequence
- Description
- NM_001163351.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.