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    LOC100624218 MORN repeat-containing protein 1 [ Sus scrofa (pig) ]

    Gene ID: 100624218, updated on 16-Nov-2023

    Summary

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    Gene symbol
    LOC100624218
    Gene description
    MORN repeat-containing protein 1
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Also known as
    MORN1
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC100624218 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 6 NC_010448.4 (64266184..64300980, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 6 NC_010448.3 (58721207..58757010)

    Chromosome 6 - NC_010448.4Genomic Context describing neighboring genes Neighboring gene SKI proto-oncogene Neighboring gene MORN repeat-containing protein 1-like Neighboring gene retention in endoplasmic reticulum sorting receptor 1 Neighboring gene peroxisomal biogenesis factor 10

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    MORN repeat-containing protein 1
    Names
    MORN repeat containing 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010448.4 Reference Sscrofa11.1 Primary Assembly

      Range
      64266184..64300980 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005655984.3 → XP_005656041.1  MORN repeat-containing protein 1 isoform X4

      Conserved Domains (2) summary
      COG4642
      Location:38 → 158
      COG4642; Uncharacterized conserved protein [Function unknown]
      pfam02493
      Location:122 → 144
      MORN; MORN repeat

    2. XM_005655983.3 → XP_005656040.1  MORN repeat-containing protein 1 isoform X2

      UniProtKB/TrEMBL
      A0A8D0VMK6
      Conserved Domains (2) summary
      COG4642
      Location:59 → 191
      COG4642; Uncharacterized conserved protein [Function unknown]
      pfam02493
      Location:155 → 177
      MORN; MORN repeat

    3. XM_005655982.3 → XP_005656039.1  MORN repeat-containing protein 1 isoform X1

      UniProtKB/TrEMBL
      A0A8D0VMK6
      Conserved Domains (2) summary
      COG4642
      Location:59 → 191
      COG4642; Uncharacterized conserved protein [Function unknown]
      pfam02493
      Location:155 → 177
      MORN; MORN repeat

    4. XM_013988730.2 → XP_013844184.1  MORN repeat-containing protein 1 isoform X3

      UniProtKB/TrEMBL
      A0A8D0VMK6
      Conserved Domains (2) summary
      COG4642
      Location:59 → 191
      COG4642; Uncharacterized conserved protein [Function unknown]
      pfam02493
      Location:155 → 177
      MORN; MORN repeat

    5. XM_005655985.3 → XP_005656042.1  MORN repeat-containing protein 1 isoform X5

      UniProtKB/TrEMBL
      A0A8D0VNJ2, A0A8D1HXH5
      Conserved Domains (2) summary
      COG4642
      Location:59 → 191
      COG4642; Uncharacterized conserved protein [Function unknown]
      pfam02493
      Location:155 → 177
      MORN; MORN repeat
    Nucleotide Protein
    Heading Accession and Version

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