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    CG10005 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 41451, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG10005provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0037972
    Locus tag
    Dmel_CG10005
    See related
    AllianceGenome:FB:FBgn0037972
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE59626; Dmel\CG10005
    Summary
    Predicted to be involved in cell morphogenesis. Predicted to be active in apical plasma membrane. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG10005 in Genome Data Viewer
    Location:
    87A4-87A4; 3-51 cM
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (11975156..11977197, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (7800878..7802919, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene Glutamate Carrier 1 Neighboring gene Transport and Golgi organization 9 Neighboring gene Glutamate Carrier 2 Neighboring gene long non-coding RNA:CR44135 Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The Gene Expression Program for the Formation of Wing Cuticle in Drosophila. Sobala LF, et al. PLoS Genet, 2016 May. PMID 27232182, Free PMC Article
    2. Fast and effective prediction of microRNA/target duplexes. Rehmsmeier M, et al. RNA, 2004 Oct. PMID 15383676, Free PMC Article
    3. The Extracellular and Cytoplasmic Domains of Syndecan Cooperate Postsynaptically to Promote Synapse Growth at the Drosophila Neuromuscular Junction. Nguyen MU, et al. PLoS One, 2016. PMID 26987116, Free PMC Article
    4. Shared enhancer gene regulatory networks between wound and oncogenic programs. Floc'hlay S, et al. Elife, 2023 May 3. PMID 37133250, Free PMC Article
    5. Gene expression profiling of brakeless mutant Drosophila embryos. Crona F, et al. Data Brief, 2015 Dec. PMID 26509186, Free PMC Article

    See all (26) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in cell morphogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    is_active_in apical plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG10005-PA
    CG10005-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      11975156..11977197 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_141880.4 → NP_650137.3  uncharacterized protein Dmel_CG10005, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_650137.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8MYX4, Q9VGF4
      Related
      FBpp0081981
      Conserved Domains (1) summary
      smart00241
      Location:59 → 162
      ZP; Zona pellucida (ZP) domain

    2. NM_001275562.1 → NP_001262491.1  uncharacterized protein Dmel_CG10005, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262491.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A0B4KH69
      Conserved Domains (1) summary
      smart00241
      Location:59 → 162
      ZP; Zona pellucida (ZP) domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A0A0B4KH69 A0A0B4KH69
    Q8MYX4 Q8MYX4

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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