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    Apol7b-ps1 apolipoprotein L7b, pseudogene 1 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 500902, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Apol7b-ps1provided by RGD
    Official Full Name
    apolipoprotein L7b, pseudogene 1provided by RGD
    Primary source
    RGD:1565356
    See related
    AllianceGenome:RGD:1565356
    Gene type
    pseudo
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    Apol7bl1; Apol3-ps1; RGD1565356
    Expression
    Biased expression in Thymus (RPKM 654.0), Spleen (RPKM 282.6) and 2 other tissues See more
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    Genomic context

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    See Apol7b-ps1 in Genome Data Viewer
    Location:
    7q34
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 7 NC_086025.1 (111037327..111056225, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 7 NC_051342.1 (109156746..109175642, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 7 NC_005106.4 (118895142..118913670)

    Chromosome 7 - NC_086025.1Genomic Context describing neighboring genes Neighboring gene Apol9a-Apol7a readthrough Neighboring gene apolipoprotein L9a Neighboring gene apolipoprotein L3-like Neighboring gene uncharacterized LOC120093820

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    Related articles in PubMed

    1. Large-scale identification and characterization of human genes that activate NF-kappaB and MAPK signaling pathways. Matsuda A, et al. Oncogene, 2003 May 22. PMID 12761501

    GeneRIFs: Gene References Into Functions

    General gene information

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    Other Names

    • apolipoprotein L2-like
    • apolipoprotein L3, pseudogene 1
    • apolipoprotein L3-like
    • apolipoprotein L7b like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086025.1 Reference GRCr8

      Range
      111037327..111056225 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_005487611.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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