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    TSPAN32 tetraspanin 32 [ Bos taurus (domestic cattle) ]

    Gene ID: 530507, updated on 27-Dec-2024

    Summary

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    Official Symbol
    TSPAN32provided by VGNC
    Official Full Name
    tetraspanin 32provided by VGNC
    Primary source
    VGNC:VGNC:54507
    See related
    BGD:BT12019; Ensembl:ENSBTAG00000002702
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See TSPAN32 in Genome Data Viewer
    Location:
    chromosome: 29
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 29 NC_037356.1 (49265270..49282239, complement)

    Chromosome 29 - NC_037356.1Genomic Context describing neighboring genes Neighboring gene CD81 molecule Neighboring gene uncharacterized LOC112444889 Neighboring gene achaete-scute family bHLH transcription factor 2 Neighboring gene tyrosine hydroxylase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037356.1 Chromosome 29 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Discovery and characterization of 91 novel transcripts expressed in cattle placenta. Kumar CG, et al. BMC Genomics, 2007 May 9. PMID 17488528, Free PMC Article
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tetraspanin-32

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001242955.2 → NP_001229884.1  tetraspanin-32

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000029
      UniProtKB/TrEMBL
      A0A3Q1M4P5
      Related
      ENSBTAP00000068565.1, ENSBTAT00000077028.1
      Conserved Domains (1) summary
      cd03153
      Location:113 → 199
      PHEMX_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), PHEMX_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model ...

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037356.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      49265270..49282239 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_010821248.4 → XP_010819550.1  tetraspanin-32 isoform X8

      UniProtKB/TrEMBL
      E1BL74
      Related
      ENSBTAP00000003500.6, ENSBTAT00000003500.7
      Conserved Domains (2) summary
      cd03153
      Location:113 → 195
      PHEMX_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), PHEMX_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment model ...
      pfam00335
      Location:95 → 223
      Tetraspannin; Tetraspanin family

    2. XM_059882950.1 → XP_059738933.1  tetraspanin-32 isoform X6

    3. XM_059882948.1 → XP_059738931.1  tetraspanin-32 isoform X4

    4. XM_059882947.1 → XP_059738930.1  tetraspanin-32 isoform X3

    5. XM_059882946.1 → XP_059738929.1  tetraspanin-32 isoform X2

    6. XM_059882945.1 → XP_059738928.1  tetraspanin-32 isoform X1

    7. XM_059882953.1 → XP_059738936.1  tetraspanin-32 isoform X10

    8. XM_059882952.1 → XP_059738935.1  tetraspanin-32 isoform X9

    9. XM_059882951.1 → XP_059738934.1  tetraspanin-32 isoform X7

    10. XM_059882949.1 → XP_059738932.1  tetraspanin-32 isoform X5

    RNA

    1. XR_009493314.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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