U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ZMYM5 zinc finger MYM-type containing 5 [ Bos taurus (domestic cattle) ]

    Gene ID: 536389, updated on 30-Jan-2025

    Summary

    Go to the top of the page Help
    Official Symbol
    ZMYM5provided by VGNC
    Official Full Name
    zinc finger MYM-type containing 5provided by VGNC
    Primary source
    VGNC:VGNC:56647
    See related
    BGD:BT13943; EnsemblRapid:ENSBTAG00070009406
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ZMYM5 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 12 NC_037339.1 (36235480..36261519)

    Chromosome 12 - NC_037339.1Genomic Context describing neighboring genes Neighboring gene gap junction protein alpha 3 Neighboring gene zinc finger MYM-type containing 2 Neighboring gene paraspeckle component 1 Neighboring gene M-phase phosphoprotein 8 Neighboring gene poly(ADP-ribose) polymerase family member 4 Neighboring gene antizyme inhibitor 1-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037339.1 Chromosome 12 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    zinc finger MYM-type protein 5
    Names
    zinc finger, MYM-type 5

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001195018.1 → NP_001181947.1  zinc finger MYM-type protein 5

      See identical proteins and their annotated locations for NP_001181947.1

      Status: PROVISIONAL

      Source sequence(s)
      GJ062078
      UniProtKB/Swiss-Prot
      A6QPH9, Q1JQB9
      Related
      ENSBTAP00070012401.1, ENSBTAT00070021105.1
      Conserved Domains (2) summary
      smart00597
      Location:563 → 638
      ZnF_TTF; zinc finger in transposases and transcription factors
      pfam06467
      Location:373 → 416
      zf-FCS; MYM-type Zinc finger with FCS sequence motif

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037339.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      36235480..36261519
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005213786.5 → XP_005213843.1  zinc finger MYM-type protein 5 isoform X1

      See identical proteins and their annotated locations for XP_005213843.1

      UniProtKB/Swiss-Prot
      A6QPH9, Q1JQB9
      Conserved Domains (2) summary
      smart00597
      Location:563 → 638
      ZnF_TTF; zinc finger in transposases and transcription factors
      pfam06467
      Location:373 → 416
      zf-FCS; MYM-type Zinc finger with FCS sequence motif

    2. XM_059892083.1 → XP_059748066.1  zinc finger MYM-type protein 5 isoform X2

      UniProtKB/TrEMBL
      A0AAA9SB88

    3. XM_005213788.4 → XP_005213845.1  zinc finger MYM-type protein 5 isoform X1

      See identical proteins and their annotated locations for XP_005213845.1

      UniProtKB/Swiss-Prot
      A6QPH9, Q1JQB9
      Conserved Domains (2) summary
      smart00597
      Location:563 → 638
      ZnF_TTF; zinc finger in transposases and transcription factors
      pfam06467
      Location:373 → 416
      zf-FCS; MYM-type Zinc finger with FCS sequence motif
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A6QPH9.2 GenPept UniProtKB/Swiss-Prot:A6QPH9

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials