U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CG1486 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 33108, updated on 9-Dec-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CG1486provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0031174
    Locus tag
    Dmel_CG1486
    See related
    AllianceGenome:FB:FBgn0031174
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG1486
    Summary
    Predicted to enable carbon-carbon lyase activity and pyridoxal phosphate binding activity. Predicted to be involved in carboxylic acid metabolic process. Predicted to be active in intracellular membrane-bounded organelle. Is expressed in several structures, including adult head; embryonic dorsal epidermis; embryonic proventriculus; embryonic ventral epidermis; and gland. Orthologous to several human genes including PDXDC1 (pyridoxal dependent decarboxylase domain containing 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CG1486 in Genome Data Viewer
    Location:
    19F4-19F4; 1-65 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) X NC_004354.4 (21324046..21328150)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) X NC_004354.3 (21195073..21199177)

    Chromosome X - NC_004354.4Genomic Context describing neighboring genes Neighboring gene SRA stem-loop interacting RNA binding protein 1 Neighboring gene anorexia Neighboring gene Dullard Neighboring gene tweety Neighboring gene flightless I

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Negative modulation of bone morphogenetic protein signaling by Dullard during wing vein formation in Drosophila. Liu Z, et al. Dev Growth Differ, 2011 Aug. PMID 21790556
    2. The Hox proteins Ubx and AbdA collaborate with the transcription pausing factor M1BP to regulate gene transcription. Zouaz A, et al. EMBO J, 2017 Oct 2. PMID 28871058, Free PMC Article
    3. Phenotypic plasticity and genotype by environment interaction for olfactory behavior in Drosophila melanogaster. Sambandan D, et al. Genetics, 2008 Jun. PMID 18505870, Free PMC Article
    4. Putative synaptic genes defined from a Drosophila whole body developmental transcriptome by a machine learning approach. Pazos Obregón F, et al. BMC Genomics, 2015 Sep 15. PMID 26370122, Free PMC Article
    5. Protein interaction mapping: a Drosophila case study. Formstecher E, et al. Genome Res, 2005 Mar. PMID 15710747, Free PMC Article

    See all (24) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables carbon-carbon lyase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables pyridoxal phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in carboxylic acid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in intracellular membrane-bounded organelle IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    uncharacterized protein
    Names
    CG1486-PA
    CG1486-PB
    NP_608450.1
    NP_728413.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_004354.4 Reference assembly

      Range
      21324046..21328150
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_134606.4 → NP_608450.1  uncharacterized protein Dmel_CG1486, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_608450.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VRG8
      Related
      FBpp0076891
      Conserved Domains (2) summary
      cl18945
      Location:159 → 384
      AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
      cl23807
      Location:725 → 801
      WWbp; WW-domain ligand protein

    2. NM_167743.2 → NP_728413.1  uncharacterized protein Dmel_CG1486, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_728413.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VRG8
      Related
      FBpp0076892
      Conserved Domains (2) summary
      cl18945
      Location:159 → 384
      AAT_I; Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the ...
      cl23807
      Location:725 → 801
      WWbp; WW-domain ligand protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VRG8 Q9VRG8

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools