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    Y40B1B.7 Coiled-coil domain-containing protein 86 [ Caenorhabditis elegans ]

    Gene ID: 173211, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y40B1B.7
    Official Full Name
    Coiled-coil domain-containing protein 86
    Primary source
    WormBase:WBGene00012739
    Locus tag
    CELE_Y40B1B.7
    See related
    AllianceGenome:WB:WBGene00012739
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Located in nucleolus. Is expressed in anal depressor muscle; body wall musculature; hypodermis; nervous system; and pharynx. Orthologous to human CCDC86 (coiled-coil domain containing 86). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y40B1B.7 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    3
    Sequence:
    Chromosome: I; NC_003279.8 (13426451..13428471, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Activin_recp domain-containing protein Neighboring gene F-box domain-containing protein Neighboring gene Solute carrier family 25 member 46 Neighboring gene ncRNA Neighboring gene Eukaryotic translation initiation factor 3 30 kDa subunit

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Determining the sub-cellular localization of proteins within Caenorhabditis elegans body wall muscle. Meissner B, et al. PLoS One, 2011. PMID 21611156, Free PMC Article
    2. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in nucleolus HDA PubMed 
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Coiled-coil domain-containing protein 86
    NP_493363.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      13426451..13428471 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_060962.4 → NP_493363.1  Coiled-coil domain-containing protein 86 [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_493363.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9XWP4
      Conserved Domains (1) summary
      pfam03879
      Location:14 → 96
      Cgr1; Cgr1 family
    Nucleotide Protein
    Heading Accession and Version

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