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    scbp-2 Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 172588, updated on 9-Dec-2024

    Summary

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    Official Symbol
    scbp-2
    Official Full Name
    Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein
    Primary source
    WormBase:WBGene00010569
    Locus tag
    CELE_K04G2.11
    See related
    AllianceGenome:WB:WBGene00010569
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be located in ribosome. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See scbp-2 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    4
    Sequence:
    Chromosome: I; NC_003279.8 (8039879..8040526, complement)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Alpha/beta hydrolase domain-containing protein aho-3 Neighboring gene ATPase family protein 2 homolog Neighboring gene SHSP domain-containing protein Neighboring gene palmitoyl-protein hydrolase Neighboring gene Protein VAC14 homolog Neighboring gene CASP-like protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Adjustments, extinction, and remains of selenocysteine incorporation machinery in the nematode lineage. Otero L, et al. RNA, 2014 Jul. PMID 24817701, Free PMC Article
    2. PKG and NHR-49 signalling co-ordinately regulate short-term fasting-induced lysosomal lipid accumulation in C. elegans. Huang WM, et al. Biochem J, 2014 Aug 1. PMID 24854345
    3. OrthoList 2: A New Comparative Genomic Analysis of Human and Caenorhabditis elegans Genes. Kim W, et al. Genetics, 2018 Oct. PMID 30120140, Free PMC Article
    4. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein
    NP_001370117.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      8039879..8040526 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001383434.1 → NP_001370117.1  Ribosomal protein eL8/eL30/eS12/Gadd45 domain-containing protein, partial [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q95ZR7
      Conserved Domains (1) summary
      pfam01248
      Location:42 → 120
      Ribosomal_L7Ae; Ribosomal protein L7Ae/L30e/S12e/Gadd45 family
    Nucleotide Protein
    Heading Accession and Version

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