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    Y40C5A.4 G-protein coupled receptors family 1 profile domain-containing protein;GP-PDE domain-containing protein [ Caenorhabditis elegans ]

    Gene ID: 177508, updated on 9-Dec-2024

    Summary

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    Official Symbol
    Y40C5A.4
    Official Full Name
    G-protein coupled receptors family 1 profile domain-containing protein;GP-PDE domain-containing protein
    Primary source
    WormBase:WBGene00021497
    Locus tag
    CELE_Y40C5A.4
    See related
    AllianceGenome:WB:WBGene00021497
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable phosphoric diester hydrolase activity. Predicted to be involved in lipid metabolic process. Predicted to be located in membrane. Is expressed in AIYL and AIYR. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See Y40C5A.4 in Genome Data Viewer
    Location:
    chromosome: IV
    Exon count:
    12
    Sequence:
    Chromosome: IV; NC_003282.8 (7349277..7365111, complement)

    Chromosome IV - NC_003282.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene GP-PDE domain-containing protein Neighboring gene Major facilitator superfamily (MFS) profile domain-containing protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003282.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Function Evidence Code Pubs
    enables phosphoric diester hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in lipid metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    G-protein coupled receptors family 1 profile domain-containing protein;GP-PDE domain-containing protein
    NP_001380166.1
    • Confirmed by transcript evidence
    NP_741440.3
    • Confirmed by transcript evidence
    NP_741441.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003282.8 Reference assembly

      Range
      7349277..7365111 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_171378.6 → NP_741441.1  G-protein coupled receptors family 1 profile domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741441.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9N3Y7
      Conserved Domains (1) summary
      cd14978
      Location:33 → 340
      7tmA_FMRFamide_R-like; FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors

    2. NM_171377.7 → NP_741440.3  G-protein coupled receptors family 1 profile domain-containing protein [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_741440.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8WTM2
      Conserved Domains (1) summary
      cd14978
      Location:33 → 340
      7tmA_FMRFamide_R-like; FMRFamide (Phe-Met-Arg-Phe) receptors and related proteins, member of the class A family of seven-transmembrane G protein-coupled receptors

    3. NM_001392328.1 → NP_001380166.1  GP-PDE domain-containing protein [Caenorhabditis elegans]

      Status: REVIEWED

      UniProtKB/TrEMBL
      W6RTL8
      Conserved Domains (1) summary
      cd08573
      Location:65 → 290
      GDPD_GDE1; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE1 and similar proteins

    RNA

    1. NR_131565.1 RNA Sequence

      Status: REVIEWED

    Nucleotide Protein
    Heading Accession and Version

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