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    vps-72 Vacuolar protein sorting-associated protein 72 homolog [ Caenorhabditis elegans ]

    Gene ID: 172769, updated on 9-Dec-2024

    Summary

    Official Symbol
    vps-72
    Official Full Name
    Vacuolar protein sorting-associated protein 72 homolog
    Primary source
    WormBase:WBGene00007645
    Locus tag
    CELE_C17E4.6
    See related
    AllianceGenome:WB:WBGene00007645
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to enable ATP-dependent H2AZ histone chaperone activity. Predicted to be involved in transcription initiation-coupled chromatin remodeling. Predicted to be active in nucleus. Orthologous to human VPS72 (vacuolar protein sorting 72 homolog). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See vps-72 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    7
    Sequence:
    Chromosome: I; NC_003279.8 (9422556..9431120)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Methyltransferase domain-containing protein Neighboring gene ABC2_membrane domain-containing protein Neighboring gene RRM domain-containing protein Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Sodium/potassium-transporting ATPase subunit beta-1 Neighboring gene ncRNA

    Interactions

    General gene information

    Gene Ontology Provided by WormBase

    Component Evidence Code Pubs
    is_active_in nucleus  
    located_in nucleus  

    General protein information

    Preferred Names
    Vacuolar protein sorting-associated protein 72 homolog
    NP_492505.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      9422556..9431120
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_060104.6NP_492505.1  Vacuolar protein sorting-associated protein 72 homolog [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_492505.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q93230
      Conserved Domains (3) summary
      pfam05764
      Location:60250
      YL1; YL1 nuclear protein
      pfam08265
      Location:291319
      YL1_C; YL1 nuclear protein C-terminal domain
      cl24021
      Location:581
      NPR3; Nitrogen Permease regulator of amino acid transport activity 3
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