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    SP2353 EGF like, fibronectin type III and laminin G domains protein pikachurin [ Drosophila mauritiana ]

    Gene ID: 117136449, updated on 7-Jul-2024

    Summary

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    Gene symbol
    SP2353
    Gene description
    EGF like, fibronectin type III and laminin G domains protein pikachurin
    See related
    EnsemblRapid:LOC117136449
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila mauritiana
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Orthologs
    fruit fly all
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    Genomic context

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    See SP2353 in Genome Data Viewer
    Location:
    chromosome: 2R
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    100 current ASM438214v1 (GCF_004382145.1) 2R NC_046668.1 (14412719..14427822)

    Chromosome 2R - NC_046668.1Genomic Context describing neighboring genes Neighboring gene putative ferric-chelate reductase 1 homolog Neighboring gene uncharacterized LOC117137744 Neighboring gene Fas associated factor casp Neighboring gene membralin Neighboring gene uncharacterized LOC117138545

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_046668.1 Chromosome 2R Reference ASM438214v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pikachurin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila mauritiana Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM438214v1 Primary Assembly

    Genomic

    1. NC_046668.1 Reference ASM438214v1 Primary Assembly

      Range
      14412719..14427822
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_033297366.1 → XP_033153257.1  pikachurin

      UniProtKB/TrEMBL
      A0A6P8JBE8
      Related
      XP_033153257.1, XM_033297366.1
      Conserved Domains (3) summary
      smart00282
      Location:1202 → 1337
      LamG; Laminin G domain
      cd00110
      Location:622 → 771
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      pfam00008
      Location:580 → 609
      EGF; EGF-like domain

    2. XM_033297367.1 → XP_033153258.1  pikachurin

      UniProtKB/TrEMBL
      A0A6P8JBE8
      Related
      XP_033153258.1, XM_033297367.1
      Conserved Domains (3) summary
      smart00282
      Location:1202 → 1337
      LamG; Laminin G domain
      cd00110
      Location:622 → 771
      LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
      pfam00008
      Location:580 → 609
      EGF; EGF-like domain
    Nucleotide Protein Strain
    Heading Accession and Version

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