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    C1h19orf81 simlar to human chromosome 19 open reading frame 81 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 292874, updated on 27-Nov-2024

    Summary

    Official Symbol
    C1h19orf81provided by RGD
    Official Full Name
    simlar to human chromosome 19 open reading frame 81provided by RGD
    Primary source
    RGD:1309036
    See related
    EnsemblRapid:ENSRNOG00000037298 AllianceGenome:RGD:1309036
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1309036
    Summary
    Orthologous to human C19orf81 (chromosome 19 open reading frame 81). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Heart (RPKM 21.4), Testes (RPKM 18.7) and 9 other tissues See more
    Orthologs
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    Genomic context

    See C1h19orf81 in Genome Data Viewer
    Location:
    1q22
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 1 NC_086019.1 (103993832..104008301, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 1 NC_051336.1 (94857301..94871323, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 1 NC_005100.4 (100346096..100361340, complement)

    Chromosome 1 - NC_086019.1Genomic Context describing neighboring genes Neighboring gene ribosome production factor 1, pseudogene 1 Neighboring gene C-type lectin domain containing 11A Neighboring gene SH3 and multiple ankyrin repeat domains 1 Neighboring gene synaptotagmin 3 Neighboring gene uncharacterized LOC108349570 Neighboring gene leucine rich repeat containing 4B

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    putative uncharacterized protein C19orf81 homolog
    Names
    Eso3 protein-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001401372.1NP_001388301.1  putative uncharacterized protein C19orf81 homolog

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000001
      UniProtKB/TrEMBL
      A0A8I5Y0H4, A6JAN5

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086019.1 Reference GRCr8

      Range
      103993832..104008301 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017588924.3XP_017444413.1  putative uncharacterized protein C19orf81 homolog isoform X3

      Conserved Domains (1) summary
      pfam15876
      Location:1140
      DUF4732; Domain of unknown function (DUF4732)
    2. XM_017588925.3XP_017444414.1  putative uncharacterized protein C19orf81 homolog isoform X3

      Conserved Domains (1) summary
      pfam15876
      Location:1140
      DUF4732; Domain of unknown function (DUF4732)
    3. XM_039104744.2XP_038960672.1  putative uncharacterized protein C19orf81 homolog isoform X3

      Conserved Domains (1) summary
      pfam15876
      Location:1140
      DUF4732; Domain of unknown function (DUF4732)
    4. XM_039104739.2XP_038960667.1  putative uncharacterized protein C19orf81 homolog isoform X2

      Conserved Domains (1) summary
      pfam15876
      Location:40165
      DUF4732; Domain of unknown function (DUF4732)
    5. XM_063283908.1XP_063139978.1  putative uncharacterized protein C19orf81 homolog isoform X1

      Related
      ENSRNOP00000083009.2, ENSRNOT00000103745.2

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001106255.1: Suppressed sequence

      Description
      NM_001106255.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.