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    ucp6 UBA domain protein Ucp6 [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2543043, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ucp6
    Official Full Name
    UBA domain protein Ucp6
    Primary source
    PomBase:SPAC3F10.13
    Locus tag
    SPOM_SPAC3F10.13
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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    Genomic context

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    See ucp6 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    1
    Sequence:
    Chromosome: I; NC_003424.3 (2845969..2848624)

    Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene tRNA-Thr Neighboring gene ncRNA Neighboring gene Spo12 family nuclear protein Neighboring gene ncRNA Neighboring gene HSR1-like GTP-binding protein Neighboring gene ncRNA Neighboring gene ribosome biogenesis protein Ltv1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003424.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. UBA domain containing proteins in fission yeast. Hartmann-Petersen R, et al. Int J Biochem Cell Biol, 2003 May. PMID 12672455
    2. Proteins containing the UBA domain are able to bind to multi-ubiquitin chains. Wilkinson CR, et al. Nat Cell Biol, 2001 Oct. PMID 11584278
    3. A global census of fission yeast deubiquitinating enzyme localization and interaction networks reveals distinct compartmentalization profiles and overlapping functions in endocytosis and polarity. Kouranti I, et al. PLoS Biol, 2010 Sep 7. PMID 20838651, Free PMC Article
    4. Dual recruitment of Cdc48 (p97)-Ufd1-Npl4 ubiquitin-selective segregase by small ubiquitin-like modifier protein (SUMO) and ubiquitin in SUMO-targeted ubiquitin ligase-mediated genome stability functions. Nie M, et al. J Biol Chem, 2012 Aug 24. PMID 22730331, Free PMC Article
    5. Yeast SREBP cleavage activation requires the Golgi Dsc E3 ligase complex. Stewart EV, et al. Mol Cell, 2011 Apr 22. PMID 21504829, Free PMC Article

    See all (13) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables polyubiquitin modification-dependent protein binding TAS
    Traceable Author Statement
    more info
    		 PubMed 
    enables ubiquitin binding TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 
    is_active_in nucleus HDA PubMed 

    General protein information

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    Preferred Names
    UBA domain protein Ucp6

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003424.3 Reference assembly

      Range
      2845969..2848624
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001019373.3 → NP_593945.1  UBA domain protein Ucp6 [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_593945.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q10187
      Conserved Domains (2) summary
      COG0789
      Location:343 → 432
      SoxR; DNA-binding transcriptional regulator, MerR family [Transcription]
      cd14330
      Location:5 → 41
      UBA_atDRM2_like; UBA domain found in Arabidopsis thaliana DNA (cytosine-5)-methyltransferase DRM2 (atDRM2) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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