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    Tsp_03313 hypothetical protein [ Trichinella spiralis ]

    Gene ID: 10908809, updated on 28-Dec-2023

    Summary

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    Gene symbol
    Tsp_03313
    Gene description
    hypothetical protein
    Locus tag
    Tsp_03313
    Gene type
    protein coding
    RNA name
    conserved hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Trichinella spiralis (strain: ISS 195)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Enoplea; Trichocephalida; Trichinellidae; Trichinella
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    Genomic context

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    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_003526941.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene heat shockprotein C Neighboring gene hypothetical protein Neighboring gene phenylalanyl-tRNA synthetase alpha chain

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003526941.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The draft genome of the parasitic nematode Trichinella spiralis. Mitreva M, et al. Nat Genet, 2011 Mar. PMID 21336279, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein insertion into ER membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of BAT3 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003526941.1 Reference assembly

      Range
      3747890..3749025
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003379609.1 → XP_003379657.1  conserved hypothetical protein [Trichinella spiralis]

      See identical proteins and their annotated locations for XP_003379657.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      E5S3A6
      Conserved Domains (1) summary
      pfam04190
      Location:45 → 194
      DUF410; Protein of unknown function (DUF410)
    Nucleotide Protein
    Heading Accession and Version

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