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    OSTLU_31014 MOP(MATE) family transporter: multidrug efflux [ Ostreococcus lucimarinus CCE9901 ]

    Gene ID: 5001417, updated on 21-Dec-2023

    Summary

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    Gene symbol
    OSTLU_31014
    Gene description
    MOP(MATE) family transporter: multidrug efflux
    Locus tag
    OSTLU_31014
    Gene type
    protein coding
    RNA name
    MOP(MATE) family transporter: multidrug efflux
    RefSeq status
    PROVISIONAL
    Organism
    Ostreococcus lucimarinus CCE9901 (strain: CCE9901)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
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    Genomic context

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    See OSTLU_31014 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    1
    Sequence:
    Chromosome: 4; NC_009358.1 (158607..160368, complement)

    Chromosome 4 - NC_009358.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene ABC(ATP-binding) family transporter Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009358.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation. Palenik B, et al. Proc Natl Acad Sci U S A, 2007 May 1. PMID 17460045, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables antiporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables xenobiotic transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    MOP(MATE) family transporter: multidrug efflux

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009358.1 Reference assembly

      Range
      158607..160368 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001417401.1 → XP_001417438.1  MOP(MATE) family transporter: multidrug efflux [Ostreococcus lucimarinus CCE9901]

      See identical proteins and their annotated locations for XP_001417438.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A4RVL2
      Conserved Domains (2) summary
      COG0534
      Location:62 → 517
      NorM; Na+-driven multidrug efflux pump [Defense mechanisms]
      cd13136
      Location:59 → 517
      MATE_DinF_like; DinF and similar proteins, a subfamily of the multidrug and toxic compound extrusion (MATE)-like proteins
    Nucleotide Protein
    Heading Accession and Version

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