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    OSTLU_16744 predicted protein [ Ostreococcus lucimarinus CCE9901 ]

    Gene ID: 5003688, updated on 21-Dec-2023

    Summary

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    Gene symbol
    OSTLU_16744
    Gene description
    predicted protein
    Locus tag
    OSTLU_16744
    Gene type
    protein coding
    RNA name
    predicted protein
    RefSeq status
    PROVISIONAL
    Organism
    Ostreococcus lucimarinus CCE9901 (strain: CCE9901)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
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    Genomic context

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    See OSTLU_16744 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    1
    Sequence:
    Chromosome: 9; NC_009363.1 (249959..251419, complement)

    Chromosome 9 - NC_009363.1Genomic Context describing neighboring genes Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein Neighboring gene predicted protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009363.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The tiny eukaryote Ostreococcus provides genomic insights into the paradox of plankton speciation. Palenik B, et al. Proc Natl Acad Sci U S A, 2007 May 1. PMID 17460045, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables tetrahydrofolylpolyglutamate synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tetrahydrofolylpolyglutamate biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in mitochondrion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    predicted protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_009363.1 Reference assembly

      Range
      249959..251419 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001419719.1 → XP_001419756.1  predicted protein [Ostreococcus lucimarinus CCE9901]

      See identical proteins and their annotated locations for XP_001419756.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A4S2I3
      Conserved Domains (2) summary
      PLN02881
      Location:1 → 483
      PLN02881; tetrahydrofolylpolyglutamate synthase
      pfam02875
      Location:306 → 368
      Mur_ligase_C; Mur ligase family, glutamate ligase domain
    Nucleotide Protein
    Heading Accession and Version

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