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    TRUGW13939_04208 hypothetical protein [ Talaromyces rugulosus ]

    Gene ID: 55991710, updated on 31-Oct-2024

    Summary

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    Gene symbol
    TRUGW13939_04208
    Gene description
    hypothetical protein
    Locus tag
    TRUGW13939_04208
    Gene type
    protein coding
    RNA name
    uncharacterized protein
    RefSeq status
    PROVISIONAL
    Organism
    Talaromyces rugulosus (strain: W13939)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Trichocomaceae; Talaromyces; Talaromyces sect. Islandici
    Orthologs
    Aspergillus fumigatus all
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    Genomic context

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    See TRUGW13939_04208 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    2
    Sequence:
    Chromosome: II; NC_049562.1 (5058052..5063467)

    Chromosome II - NC_049562.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_049562.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in COPII vesicle coating IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in Golgi organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in autophagy IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to endoplasmic reticulum exit site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in ER to Golgi transport vesicle membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum exit site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_049562.1 Reference assembly

      Range
      5058052..5063467
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_035487385.1 → XP_035343278.1  uncharacterized protein TRUGW13939_04208 [Talaromyces rugulosus]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A7H8QSZ6
      Conserved Domains (5) summary
      PTZ00395
      Location:1279 → 1568
      PTZ00395; Sec24-related protein; Provisional
      PHA03247
      Location:343 → 830
      PHA03247; large tegument protein UL36; Provisional
      pfam12935
      Location:181 → 376
      Sec16_N; Vesicle coat trafficking protein Sec16 N-terminus
      pfam12931
      Location:1012 → 1316
      Sec16_C; Sec23-binding domain of Sec16
      pfam12932
      Location:837 → 954
      Sec16; Vesicle coat trafficking protein Sec16 mid-region
    Nucleotide Protein
    Heading Accession and Version

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