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    SNCAIP synuclein alpha interacting protein [ Gallus gallus (chicken) ]

    Gene ID: 426796, updated on 3-Dec-2024

    Summary

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    Symbol
    SNCAIPprovided by CGNC
    Full Name
    synuclein alpha interacting proteinprovided by CGNC
    Primary source
    CGNC:3969
    See related
    Ensembl:ENSGALG00010001252
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See SNCAIP in Genome Data Viewer
    Location:
    chromosome: Z
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) Z NC_052572.1 (85095021..85171210)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) Z NC_059536.1 (85095021..85171210)

    Chromosome Z - NC_052572.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 475 Neighboring gene uncharacterized LOC101748608 Neighboring gene uncharacterized LOC121108293 Neighboring gene sorting nexin 2 Neighboring gene uncharacterized LOC121108294

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synphilin-1
    Names
    synuclein, alpha interacting protein (synphilin)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052572.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      85095021..85171210
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040655838.2 → XP_040511772.1  synphilin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0X1S5, A0A8V0X4T2
      Related
      ENSGALP00010001446.1, ENSGALT00010002900.1
      Conserved Domains (3) summary
      COG0666
      Location:324 → 505
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:349 → 377
      ANK; ANK repeat [structural motif]
      pfam16700
      Location:507 → 550
      SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain

    2. XM_040655839.2 → XP_040511773.1  synphilin-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0X4T2
      Conserved Domains (3) summary
      COG0666
      Location:324 → 505
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:349 → 377
      ANK; ANK repeat [structural motif]
      pfam16700
      Location:507 → 550
      SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain

    3. XM_424409.8 → XP_424409.4  synphilin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0X1S5, A0A8V0X4T2
      Conserved Domains (3) summary
      COG0666
      Location:324 → 505
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:349 → 377
      ANK; ANK repeat [structural motif]
      pfam16700
      Location:507 → 550
      SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain

    4. XM_004949702.5 → XP_004949759.2  synphilin-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0X4T2
      Related
      ENSGALP00010001445.1, ENSGALT00010002899.1
      Conserved Domains (3) summary
      COG0666
      Location:324 → 505
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:349 → 377
      ANK; ANK repeat [structural motif]
      pfam16700
      Location:507 → 550
      SNCAIP_SNCA_bd; Synphilin-1 alpha-Synuclein-binding domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059536.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      85095021..85171210
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046937258.1 → XP_046793214.1  synphilin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0X1S5, A0A8V0X4T2

    2. XM_046937260.1 → XP_046793216.1  synphilin-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0X4T2

    3. XM_046937257.1 → XP_046793213.1  synphilin-1 isoform X1

      UniProtKB/TrEMBL
      A0A8V0X1S5, A0A8V0X4T2

    4. XM_046937259.1 → XP_046793215.1  synphilin-1 isoform X2

      UniProtKB/TrEMBL
      A0A8V0X4T2
    Nucleotide Protein Strain
    Heading Accession and Version

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