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    ASB14 ankyrin repeat and SOCS box containing 14 [ Pyrgilauda ruficollis (rufous-necked snowfinch) ]

    Gene ID: 121353023, updated on 3-Aug-2024

    Summary

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    Gene symbol
    ASB14
    Gene description
    ankyrin repeat and SOCS box containing 14
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pyrgilauda ruficollis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Passeridae; Pyrgilauda
    Orthologs
    human mouse all
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    Genomic context

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    See ASB14 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current ASM1759013v1 (GCF_017590135.1) Unplaced Scaffold NW_024508101.1 (12243735..12262167)

    NW_024508101.1Genomic Context describing neighboring genes Neighboring gene phosphodiesterase 12 Neighboring gene dynein axonemal heavy chain 12 Neighboring gene adaptor protein, phosphotyrosine interacting with PH domain and leucine zipper 1 Neighboring gene HESX homeobox 1 Neighboring gene interleukin 17 receptor D

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_024508101 Unplaced Scaffold Reference ASM1759013v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intracellular signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ankyrin repeat and SOCS box protein 14

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Pyrgilauda ruficollis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1759013v1 Primary Assembly

    Genomic

    1. NW_024508101.1 Reference ASM1759013v1 Primary Assembly

      Range
      12243735..12262167
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041466517.1 → XP_041322451.1  ankyrin repeat and SOCS box protein 14

      Conserved Domains (4) summary
      PHA02874
      Location:146 → 444
      PHA02874; ankyrin repeat protein; Provisional
      COG0666
      Location:55 → 241
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd03730
      Location:531 → 587
      SOCS_ASB14; SOCS (suppressors of cytokine signaling) box of ASB14-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. ...
      sd00045
      Location:184 → 215
      ANK; ANK repeat [structural motif]

    2. XM_041466548.1 → XP_041322482.1  ankyrin repeat and SOCS box protein 14

      Conserved Domains (4) summary
      PHA02874
      Location:146 → 444
      PHA02874; ankyrin repeat protein; Provisional
      COG0666
      Location:55 → 241
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd03730
      Location:531 → 587
      SOCS_ASB14; SOCS (suppressors of cytokine signaling) box of ASB14-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. ...
      sd00045
      Location:184 → 215
      ANK; ANK repeat [structural motif]

    3. XM_041466558.1 → XP_041322492.1  ankyrin repeat and SOCS box protein 14

      Conserved Domains (4) summary
      PHA02874
      Location:146 → 444
      PHA02874; ankyrin repeat protein; Provisional
      COG0666
      Location:55 → 241
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd03730
      Location:531 → 587
      SOCS_ASB14; SOCS (suppressors of cytokine signaling) box of ASB14-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. ...
      sd00045
      Location:184 → 215
      ANK; ANK repeat [structural motif]

    4. XM_041466531.1 → XP_041322465.1  ankyrin repeat and SOCS box protein 14

      Conserved Domains (4) summary
      PHA02874
      Location:146 → 444
      PHA02874; ankyrin repeat protein; Provisional
      COG0666
      Location:55 → 241
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd03730
      Location:531 → 587
      SOCS_ASB14; SOCS (suppressors of cytokine signaling) box of ASB14-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. ...
      sd00045
      Location:184 → 215
      ANK; ANK repeat [structural motif]

    5. XM_041466566.1 → XP_041322500.1  ankyrin repeat and SOCS box protein 14

      Conserved Domains (4) summary
      PHA02874
      Location:146 → 444
      PHA02874; ankyrin repeat protein; Provisional
      COG0666
      Location:55 → 241
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd03730
      Location:531 → 587
      SOCS_ASB14; SOCS (suppressors of cytokine signaling) box of ASB14-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. ...
      sd00045
      Location:184 → 215
      ANK; ANK repeat [structural motif]

    6. XM_041466540.1 → XP_041322474.1  ankyrin repeat and SOCS box protein 14

      Conserved Domains (4) summary
      PHA02874
      Location:146 → 444
      PHA02874; ankyrin repeat protein; Provisional
      COG0666
      Location:55 → 241
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      cd03730
      Location:531 → 587
      SOCS_ASB14; SOCS (suppressors of cytokine signaling) box of ASB14-like proteins. ASB family members have a C-terminal SOCS box and an N-terminal ankyrin-related sequence. The general function of the SOCS box is the recruitment of the ubiquitin-transferase system. ...
      sd00045
      Location:184 → 215
      ANK; ANK repeat [structural motif]

    RNA

    1. XR_005955026.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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