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    DEHA2F11066g DEHA2F11066p [ Debaryomyces hansenii CBS767 ]

    Gene ID: 2903586, updated on 17-May-2024

    Summary

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    Gene symbol
    DEHA2F11066g
    Gene description
    DEHA2F11066p
    Locus tag
    DEHA2F11066g
    See related
    FungiDB:DEHA2F11066g; VEuPathDB:DEHA2F11066g
    Gene type
    protein coding
    RNA name
    DEHA2F11066p
    RefSeq status
    PROVISIONAL
    Organism
    Debaryomyces hansenii CBS767 (strain: CBS767, type-material: culture from type material of Debaryomyces hansenii)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces
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    Genomic context

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    See DEHA2F11066g in Genome Data Viewer
    Location:
    chromosome: F
    Exon count:
    1
    Sequence:
    Chromosome: F; NC_006048.2 (952604..954004, complement)

    Chromosome F - NC_006048.2Genomic Context describing neighboring genes Neighboring gene DEHA2F11022p Neighboring gene DEHA2F11044p Neighboring gene DEHA2F11088p Neighboring gene DEHA2F11110p

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_006048.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of preribosome, large subunit precursor IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DEHA2F11066p
    XP_460846.2
    • similar to uniprot|Q12024 Saccharomyces cerevisiae YOR272W YTM1 microtubule-associated protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_006048.2 Reference assembly

      Range
      952604..954004 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_460846.1 → XP_460846.2  DEHA2F11066p [Debaryomyces hansenii CBS767]

      See identical proteins and their annotated locations for XP_460846.2

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      Q6BLS5
      Conserved Domains (4) summary
      COG2319
      Location:105 → 458
      WD40; WD40 repeat [General function prediction only]
      cd00200
      Location:133 → 458
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      pfam08154
      Location:8 → 78
      NLE; NLE (NUC135) domain
      sd00039
      Location:168 → 214
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q6BLS5.2

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