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    Nubp1 NUBP iron-sulfur cluster assembly factor 1 [ Drosophila persimilis ]

    Gene ID: 6589129, updated on 15-May-2024

    Summary

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    Gene symbol
    Nubp1
    Gene description
    NUBP iron-sulfur cluster assembly factor 1
    Locus tag
    Dper_GL18780
    See related
    EnsemblRapid:LOC6589129
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila persimilis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    GL18780; GL18780-PA
    Orthologs
    fruit fly all
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    Genomic context

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    See Nubp1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    101 current DperRS2 (GCF_003286085.1) Unplaced Scaffold NW_020825298.1 (9892799..9893843)

    NW_020825298.1Genomic Context describing neighboring genes Neighboring gene COX assembly mitochondrial protein homolog Neighboring gene tRNA splicing endonuclease subunit 2 Neighboring gene Proteasome beta4 subunit Neighboring gene structural maintenance of chromosomes 4-like protein gluon Neighboring gene Chitin and LDLR binding deacetylase 3 Neighboring gene U6 snRNA-associated Sm-like protein LSm7 Neighboring gene Bub3 interacting GLEBS and Zinc finger domain protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_020825298 Unplaced Scaffold Reference DperRS2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 4 iron, 4 sulfur cluster binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent FeS chaperone activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in iron-sulfur cluster assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cytosolic Fe-S cluster assembly factor NUBP1 homolog
    Names
    Dper\GL18780
    Dper\GL18780-PA
    dper_GLEANR_20919

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila persimilis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DperRS2

    Genomic

    1. NW_020825298.1 Reference DperRS2

      Range
      9892799..9893843
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002014713.2 → XP_002014749.1  cytosolic Fe-S cluster assembly factor NUBP1 homolog

      See identical proteins and their annotated locations for XP_002014749.1

      UniProtKB/Swiss-Prot
      B4G8R5
      Related
      XP_002014749.1, XM_002014713.2
      Conserved Domains (2) summary
      COG1149
      Location:57 → 310
      COG1149; MinD superfamily P-loop ATPase, contains an inserted ferredoxin domain [General function prediction only]
      pfam10609
      Location:54 → 307
      ParA; NUBPL iron-transfer P-loop NTPase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B4G8R5.1 GenPept UniProtKB/Swiss-Prot:B4G8R5

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