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Links from Protein

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    Pmar_PMAR007244 hypothetical protein [ Perkinsus marinus ATCC 50983 ]

    Gene ID: 9053769, updated on 26-Jun-2024

    Summary

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    Gene symbol
    Pmar_PMAR007244
    Gene description
    hypothetical protein
    Locus tag
    Pmar_PMAR007244
    See related
    VectorBase:PMAR007244
    Gene type
    protein coding
    RNA name
    conserved hypothetical protein
    RefSeq status
    PROVISIONAL
    Organism
    Perkinsus marinus ATCC 50983 (strain: ATCC 50983, culture-collection: ATCC:50983)
    Lineage
    Eukaryota; Alveolata; Perkinsea; Perkinsida; Perkinsidae; Perkinsus
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    Genomic context

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    See Pmar_PMAR007244 in Genome Data Viewer
    Exon count:
    2

    NW_003216911.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003216911.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables electron transfer activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables flavin adenine dinucleotide binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables succinate dehydrogenase (quinone) activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mitochondrial electron transport, succinate to ubiquinone IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in tricarboxylic acid cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein
    XP_002788434.1
    • encoded by transcript Pmar_PMAR007244-RA

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    mRNA and Protein(s)

    1. XM_002788388.1 → XP_002788434.1  conserved hypothetical protein [Perkinsus marinus ATCC 50983]

      See identical proteins and their annotated locations for XP_002788434.1

      UniProtKB/TrEMBL
      C5K5L2
      Conserved Domains (3) summary
      PTZ00139
      Location:1 → 567
      PTZ00139; Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
      pfam02910
      Location:460 → 570
      Succ_DH_flav_C; Fumarate reductase flavoprotein C-term
      cl21454
      Location:29 → 446
      NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
    Nucleotide Protein
    Heading Accession and Version

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