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    sri-5 Serpentine Receptor, class H;Serpentine Receptor, class T [ Caenorhabditis elegans ]

    Gene ID: 185064, updated on 9-Dec-2024

    Summary

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    Official Symbol
    sri-5
    Official Full Name
    Serpentine Receptor, class H;Serpentine Receptor, class T
    Primary source
    WormBase:WBGene00005517
    Locus tag
    CELE_F28D9.2
    See related
    AllianceGenome:WB:WBGene00005517
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Caenorhabditis elegans (strain: Bristol N2)
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis
    Summary
    Predicted to be involved in detection of chemical stimulus involved in sensory perception. Predicted to be located in membrane. Is expressed in egg-laying apparatus; neurons; pharynx; and ventral nerve cord. [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

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    See sri-5 in Genome Data Viewer
    Location:
    chromosome: I
    Exon count:
    8
    Sequence:
    Chromosome: I; NC_003279.8 (11182795..11186206)

    Chromosome I - NC_003279.8Genomic Context describing neighboring genes Neighboring gene Transmembrane protein 242 Neighboring gene ncRNA Neighboring gene PWI domain-containing protein Neighboring gene ncRNA Neighboring gene Zinc finger protein ztf-6

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003279.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the nematode C. elegans: a platform for investigating biology. C. elegans Sequencing Consortium. Science, 1998 Dec 11. PMID 9851916

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by WormBase

    Process Evidence Code Pubs
    involved_in detection of chemical stimulus involved in sensory perception IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    Serpentine Receptor, class H;Serpentine Receptor, class T
    NP_001021424.1
    • Confirmed by transcript evidence
    NP_001021425.1
    • Confirmed by transcript evidence

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003279.8 Reference assembly

      Range
      11182795..11186206
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001026253.3 → NP_001021424.1  Serpentine Receptor, class T [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001021424.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q7YZP5
      Conserved Domains (1) summary
      pfam10327
      Location:8 → 308
      7TM_GPCR_Sri; Serpentine type 7TM GPCR chemoreceptor Sri

    2. NM_001026254.4 → NP_001021425.1  Serpentine Receptor, class H [Caenorhabditis elegans]

      See identical proteins and their annotated locations for NP_001021425.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      O62186
      Conserved Domains (1) summary
      cl11665
      Location:8 → 283
      7TM_GPCR_Srh; Serpentine type 7TM GPCR chemoreceptor Srh
    Nucleotide Protein
    Heading Accession and Version

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