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    LOC6629610 transcription factor Ouib [ Drosophila virilis ]

    Gene ID: 6629610, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC6629610
    Gene description
    transcription factor Ouib
    Locus tag
    Dvir_GJ22679
    See related
    EnsemblRapid:LOC6629610
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila virilis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila
    Also known as
    GJ22679; GJ22679-PB
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC6629610 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current DvirRS2 (GCF_003285735.1) Unplaced Scaffold NW_022587574.1 (5992244..5996645)

    NW_022587574.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6629260 Neighboring gene transcription factor Ouib Neighboring gene uncharacterized LOC26530412 Neighboring gene zinc finger protein 850 Neighboring gene transcription factor Ouib Neighboring gene VPS35 endosomal protein sorting factor-like Neighboring gene PP2C-like domain-containing protein CG9801

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_022587574 Unplaced Scaffold Reference DvirRS2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Evolution of genes and genomes on the Drosophila phylogeny. Drosophila 12 Genomes Consortium, et al. Nature, 2007 Nov 8. PMID 17994087
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor Ouib
    Names
    Dvir\GJ22679
    Dvir\GJ22679-PB
    dvir_GLEANR_8058

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila virilis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DvirRS2

    Genomic

    1. NW_022587574.1 Reference DvirRS2

      Range
      5992244..5996645
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002054639.3 → XP_002054675.3  transcription factor Ouib

      UniProtKB/TrEMBL
      B4LZG0
      Related
      XP_002054675.3, XM_002054639.3
      Conserved Domains (5) summary
      smart00868
      Location:5 → 78
      zf-AD; Zinc-finger associated domain (zf-AD)
      COG5048
      Location:175 → 322
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:255 → 275
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam12874
      Location:309 → 333
      zf-met; Zinc-finger of C2H2 type
      pfam13465
      Location:270 → 292
      zf-H2C2_2; Zinc-finger double domain
    Nucleotide Protein Strain
    Heading Accession and Version

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