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    MYB31 myb domain protein 31 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843804, updated on 18-Sep-2024

    Summary

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    Official Symbol
    MYB31
    Official Full Name
    myb domain protein 31
    Primary source
    TAIR:AT1G74650
    Locus tag
    AT1G74650
    See related
    Araport:AT1G74650
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA MYB DOMAIN PROTEIN 31; ATMYB31; ATY13; F1M20.33; F1M20_33; myb domain protein 31
    Summary
    Member of the R2R3 factor gene family.
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    Genomic context

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    See MYB31 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (28041146..28043022)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene ncRNA Neighboring gene mini zinc finger 1 Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AtMYB31 is a wax regulator associated with reproductive development in Arabidopsis. Shi L, et al. Planta, 2022 Jul 4. PMID 35781548
    2. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
    3. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article
    4. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001334658.1
    NM_001334659.1
    NM_106123.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    myb domain protein 31
    NP_177603.1
    • myb domain protein 31 (MYB31); CONTAINS InterPro DOMAIN/s: SANT, DNA-binding (InterPro:IPR001005), Homeodomain-like (InterPro:IPR009057), Myb, DNA-binding (InterPro:IPR014778), HTH transcriptional regulator, Myb-type, DNA-binding (InterPro:IPR017930), Homeodomain-related (InterPro:IPR012287), Myb transcription factor (InterPro:IPR015495); BEST Arabidopsis thaliana protein match is: myb domain protein 96 (TAIR:AT5G62470.2); Has 9009 Blast hits to 8400 proteins in 544 species: Archae - 0; Bacteria - 6; Metazoa - 828; Fungi - 478; Plants - 5790; Viruses - 3; Other Eukaryotes - 1904 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28041146..28043022
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106123.4 → NP_177603.1  myb domain protein 31 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_177603.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WUC8, A0A7G2E8Y1, Q9CA52
      Conserved Domains (1) summary
      PLN03212
      Location:5 → 117
      PLN03212; Transcription repressor MYB5; Provisional

    2. NM_001334658.1 → NP_001320341.1  myb domain protein 31 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178W7D2, A0A1P8AMJ1, A0A384KT80
      Conserved Domains (1) summary
      PLN03212
      Location:7 → 36
      PLN03212; Transcription repressor MYB5; Provisional

    3. NM_001334659.1 → NP_001320340.1  myb domain protein 31 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AMH1
      Conserved Domains (1) summary
      PLN03212
      Location:1 → 41
      PLN03212; Transcription repressor MYB5; Provisional
    Nucleotide Protein
    Heading Accession and Version

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