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Status
Public on Oct 20, 2011
Title
Candida tenuis 385K tiled array
Technology type
in situ oligonucleotide
Distribution
custom-commercial
Organism
Yamadazyma tenuis ATCC 10573 Manufacturer
NimbleGen
Manufacture protocol
High-density DNA array prepared with Maskless Array Synthesizer (MAS) technology. See manufacturer's website at http://www.nimblegen.com/.
Description
NimbleGen design name: 090803_CT_DW_EXP; NimbleGen design ID: 23870 A tiled genome array from Candida tenuis NRRL Y-1498 with 363,196 probes (average probe length 53.1 +/- 3.8 nt, median spacing distance 24 nt). The design includes random GC and other control probes.
Submission date
Oct 21, 2010
Last update date
Oct 20, 2011
Contact name
Dana Jasmine Wohlbach
E-mail(s)
[email protected] Organization name
Dickinson College
Department
Biology
Street address
P.O. Box 1773
City
Carlisle
State/province
PA
ZIP/Postal code
17013
Country
USA
Samples (6)
GSM611317 , GSM611318 , GSM611319 , GSM611320 , GSM611321 , GSM611322 Series (2)
GSE24856 Expression analysis of Candida tenuis NRRL Y-1498 grown in glucose or xylose
GSE24858 Expression analysis of various fungi grown in glucose or xylose
Data table header descriptions ID Nprobes Number of probes on the array corresponding to that gene. All probes mapping to a gene are indicated in the included file CtenProbeMapping.txt
SPOT_ID Candida tenuis NRRL Y-1498 protein ID number, as available on the genome portal (http://www.jgi.doe.gov/tenuis/)
Data table ID Nprobes SPOT_ID 95710
36
95710
102379
59
102379
108050
36
108050
96716
43
96716
102422
29
102422
108503
18
108503
109858
16
109858
110941
42
110941
100590
21
100590
100984
25
100984
108920
38
108920
94932
16
94932
109134
34
109134
109008
17
109008
98644
14
98644
96069
50
96069
109096
20
109096
98532
11
98532
108585
7
108585
95235
9
95235
5452 84 Kbytes .Supplementary file Size Download File type/resource GPL11082_090803_CT_DW_EXP.ndf.gz
16.2 Mb
(ftp) (http) NDF
GPL11082_CtenProbeMapping.txt.gz
296.0 Kb
(ftp) (http) TXT
