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Platform GPL14907 Query DataSets for GPL14907
Status Public on Nov 23, 2011
Title SA Biosciences Human Genome V2.0 miRNA PCR Arrays: MAH-3200 (MAH-3100 & MAH-3101)
Technology type RT-PCR
Distribution virtual
Organism Homo sapiens
Manufacturer SA Biosciences - A Qiagen Company
Manufacture protocol see manufacturer's website
 
 
Submission date Nov 21, 2011
Last update date Nov 23, 2011
Contact name Pruthvi S. R. Nagilla
E-mail(s) [email protected]
Phone 412 624-3062
URL http://www.idm.pitt.edu/directory/bios/ayyavoo.asp
Organization name University of Pittsburgh
Department Infectious Diseases and Microbiology
Street address 416 Parran Hall, 130 DeSoto Street
City Pittsburgh
State/province PA
ZIP/Postal code 15261
Country USA
 
Samples (12) GSM837600, GSM837601, GSM837602, GSM837603, GSM837604, GSM837605 
Series (2)
GSE33837 Comparative Expression Profile of miRNA and mRNA in Primary Peripheral Blood Mononuclear Cells Infected with Human Immunodeficiency Virus (HIV-1) [miRNA]
GSE33879 Comparative Expression Profile of miRNA and mRNA in Primary Peripheral Blood Mononuclear Cells Infected with Human Immunodeficiency Virus (HIV-1)

Data table header descriptions
ID
Plate Either MAH-3100 or MAH-3101 with 384 miRNAs in each plate
Position Position of particular miRNA assay on particular plate
miRBASE V10.0 accession number Accession number in miRBASE database
miRNA_ID
SEQUENCE Probe Sequence
RT2 miRNA qPCR Assay Catalog Number Catalog number for individual miRNA assay from manufacturer i.e. SA Biosciences

Data table
ID Plate Position miRBASE V10.0 accession number miRNA_ID SEQUENCE RT2 miRNA qPCR Assay Catalog Number
1 MAH-3100 A01 MIMAT0000773 hsa-miR-346 UGUCUGCCCGCAUGCCUGCCUCU MPH00175A
2 MAH-3100 A02 MIMAT0001080 hsa-miR-196b UAGGUAGUUUCCUGUUGUUGGG MPH00086A
3 MAH-3100 A03 MIMAT0000271 hsa-miR-214 ACAGCAGGCACAGACAGGCAGU MPH01223A
4 MAH-3100 A04 MIMAT0000070 hsa-miR-17 CAAAGUGCUUACAGUGCAGGUAG MPH00063A
5 MAH-3100 A05 MIMAT0003880 hsa-miR-671-5p AGGAAGCCCUGGAGGGGCUGGAG MPH00422A
6 MAH-3100 A06 MIMAT0003313 hsa-miR-643 ACUUGUAUGCUAGCUCAGGUAG MPH00399A
7 MAH-3100 A07 MIMAT0003276 hsa-miR-608 AGGGGUGGUGUUGGGACAGCUCCGU MPH00364A
8 MAH-3100 A08 MIMAT0002172 hsa-miR-376b AUCAUAGAGGAAAAUCCAUGUU MPH00194A
9 MAH-3100 A09 MIMAT0004987 hsa-miR-944 AAAUUAUUGUACAUCGGAUGAG MPH00477A
10 MAH-3100 A10 MIMAT0000268 hsa-miR-211 UUCCCUUUGUCAUCCUUCGCCU MPH00108A
11 MAH-3100 A11 MIMAT0003280 hsa-miR-612 GCUGGGCAGGGCUUCUGAGCUCCUU MPH00368A
12 MAH-3100 A12 MIMAT0000460 hsa-miR-194 UGUAACAGCAACUCCAUGUGGA MPH00083A
13 MAH-3100 A13 MIMAT0003329 hsa-miR-411 UAGUAGACCGUAUAGCGUACG MPH00206A
14 MAH-3100 A14 MIMAT0003285 hsa-miR-548c-3p CAAAAAUCUCAAUUACUUUUGC MPH01342A
15 MAH-3100 A15 MIMAT0000687 hsa-miR-299-3p UAUGUGGGAUGGUAAACCGCUU MPH01243A
16 MAH-3100 A16 MIMAT0002840 hsa-miR-523 GAACGCGCUUCCCUAUAGAGGGU MPH01333A
17 MAH-3100 A17 MIMAT0000737 hsa-miR-382 GAAGUUGUUCGUGGUGGAUUCG MPH00201A
18 MAH-3100 A18 MIMAT0002827 hsa-miR-515-3p GAGUGCCUUCUUUUGGAGCGUU MPH01315A
19 MAH-3100 A19 MIMAT0000728 hsa-miR-375 UUUGUUCGUUCGGCUCGCGUGA MPH00191A
20 MAH-3100 A20 MIMAT0000226 hsa-miR-196a UAGGUAGUUUCAUGUUGUUGGG MPH00085A

Total number of rows: 768

Table truncated, full table size 56 Kbytes.




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