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Platform GPL15637 Query DataSets for GPL15637
Status Public on Nov 06, 2012
Title Agilent DasSarma Laboratory Halobacterium sp. NRC-1 composite array
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Halobacterium salinarum NRC-1
Manufacturer Agilent
Manufacture protocol See manufacturer's web site at http://www.agilent.com/.
 
Description This Platform represents a composite of several arrays.
 
Contributor(s) DasSarma S
Submission date May 31, 2012
Last update date Nov 06, 2012
Contact name Priya DasSarma
E-mail(s) [email protected]
Phone 410-234-8861
Organization name UMB
Department Microbiology
Street address 701 East Pratt Street, Suite 236
City Baltimore
State/province MD
ZIP/Postal code 21202
Country USA
 
Samples (7) GSM940781, GSM940782, GSM940783, GSM940784, GSM940785, GSM2787697 
Series (2)
GSE38374 Metabolic responses of the model archaeon Halobacterium sp. NRC-1 to oxygen limitation
GSE104012 H. salinarum R1 wildtype vs cyc-

Data table header descriptions
ID Gene number
ORF Gene symbol
SPOT_ID Spot identifier
GENOME_ACC RefSeq genome accession.version
GENE_SYMBOL Gene symbol
ACCESSION_STRING Accession string
CHROMOSOMAL_LOCATION Chromosomal location
DESCRIPTION Description

Data table
ID ORF SPOT_ID GENOME_ACC GENE_SYMBOL ACCESSION_STRING CHROMOSOMAL_LOCATION DESCRIPTION
1 vng1 NC_002607.1 vng1 unknown|ref|NC_002607.1 chr1:248-1450
2 yvrO NC_002607.1 yvrO transport|ref|NC_002607.1 chr1:1450-2112 amino acid ABC transporter, ATP-binding protein
3 vng3 NC_002607.1 vng3 cellular process|ref|NC_002607.1 chr1:2145-3251
5 vng5 NC_002607.1 vng5 unknown|ref|NC_002607.1 chr1:3322-5640
6 glmS NC_002607.1 glmS amino acid metabolism|ref|NC_002607.1 chr1:7451-5649 glutamine-fructose-6-phosphate transamise
8 graD5 NC_002607.1 graD5 nucleotide metabolism|ref|NC_002607.1 chr1:8641-7457 glucose-1-phosphate thymidylyltransferase
9 graD2 NC_002607.1 graD2 nucleotide metabolism|ref|NC_002607.1 chr1:9860-8658 glucose-1-phosphate thymidylyltransferase
11 hsx NC_002607.1 hsx general function prediction only|ref|NC_002607.1 chr1:9980-11410 probable sugar transferase
13 vng13 NC_002607.1 vng13 DNA metabolism|ref|NC_002607.1 chr1:12614-11481
14 vng14 NC_002607.1 vng14 amino acid metabolism|ref|NC_002607.1 chr1:12978-13184
15 vng15 NC_002607.1 vng15 unknown|ref|NC_002607.1 chr1:13644-13465
16 vng16 NC_002607.1 vng16 unknown|ref|NC_002607.1 chr1:14180-13812
17 vng17 NC_002607.1 vng17 unknown|ref|NC_002607.1 chr1:14484-14777
18 vng18 NC_002607.1 vng18 unknown|ref|NC_002607.1 chr1:14868-15128
19 vng19 NC_002607.1 vng19 unknown|ref|NC_002607.1 chr1:15310-15405
20 vng20 NC_002607.1 vng20 unknown|ref|NC_002607.1 chr1:16051-15422
21 vng21 NC_002607.1 vng21 DNA metabolism|ref|NC_002607.1 chr1:16342-17703
22 vng22 NC_002607.1 vng22 unknown|ref|NC_002607.1 chr1:18357-18899
23 vng23 NC_002607.1 vng23 unknown|ref|NC_002607.1 chr1:18895-19527
24 vng24 NC_002607.1 vng24 unknown|ref|NC_002607.1 chr1:20023-19706

Total number of rows: 2531

Table truncated, full table size 238 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL15637_probe_sequences.txt.gz 150.6 Kb (ftp)(http) TXT

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