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Platform GPL20216 Query DataSets for GPL20216
Status Public on Dec 01, 2015
Title Agilent-038776 P_veroni_YdBTEX
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Pseudomonas veronii 1YdBTEX2
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
Description Arrays of this design have barcodes that begin with 16038776 or 2538776.
Orientation:
Features are numbered numbered Left-to-Right, Top-to-Bottom as scanned by an Agilent scanner (barcode on the left, DNA on the back surface, scanned through the glass), matching the FeatureNum output from Agilent's Feature Extraction software.
The ID column represents the Agilent Feature Extraction feature number.
Rows and columns are numbered as scanned by an Axon Scanner (barcode on the bottom, DNA on the front surface).
To match data scanned on an Axon scanner, use the RefNumber column contained in the Agilent-provided GAL file as the ID_REF column in sample submissions.
 
Contributor(s) Moreno-Forero SK, van der Meer JR
Submission date May 19, 2015
Last update date Dec 01, 2015
Contact name Silvia K. Moreno-Forero
E-mail(s) [email protected]
Organization name University of Lausanne
Department Department of Fundamental Microbiology
Street address Batiment Biophore, Unil Sorge
City Lausanne
State/province Vaud
ZIP/Postal code 1015
Country Switzerland
 
Samples (12) GSM1690215, GSM1690216, GSM1690217, GSM1690218, GSM1690219, GSM1690220 
Series (1)
GSE69022 Transcriptional responses of Pseudomonas veronii 1YdBTEX2 to the exposure to laboratory induced matric and solute stresses

Data table header descriptions
ID Agilent feature number
SPOT_ID Spot identifier

Data table
ID SPOT_ID
YdB-peg1358 YdB-peg1358
YdB-peg5067 YdB-peg5067
YdB-peg103 YdB-peg103
YdB-peg1451 YdB-peg1451
YdB-peg1648 YdB-peg1648
YdB-peg782 YdB-peg782
YdB-peg2222 YdB-peg2222
YdB-peg2759 YdB-peg2759
YdB-peg2861 YdB-peg2861
YdB-peg5623 YdB-peg5623
YdB-peg6201 YdB-peg6201
YdB-peg5582 YdB-peg5582
YdB-peg6059 YdB-peg6059
YdB-peg711 YdB-peg711
YdB-peg6393 YdB-peg6393
YdB-peg1506 YdB-peg1506
YdB-peg5484 YdB-peg5484
YdB-peg5113 YdB-peg5113
YdB-peg4493 YdB-peg4493
YdB-peg4567 YdB-peg4567

Total number of rows: 6360

Table truncated, full table size 146 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL20216_038776_D_GEO_20120210-Pver-1YdBTEX2.txt.gz 1.8 Mb (ftp)(http) TXT

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