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Platform GPL20248 Query DataSets for GPL20248
Status Public on May 28, 2015
Title Agilent-055694 Bacillus Calmette Guerin 8X15K array [Probe Name Version]
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Mycobacterium tuberculosis variant bovis BCG
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
Description Bacillus Calmette Guerin (BCG)
 
Submission date May 27, 2015
Last update date May 28, 2015
Contact name qian jin
E-mail(s) [email protected]
Organization name MSP
Street address libing road
City shanghai
ZIP/Postal code 201203
Country China
 
Samples (8) GSM1700404, GSM1700405, GSM1700406, GSM1700407, GSM1700408, GSM1700409 
Series (1)
GSE69379 Development of gene expression for an INH-responsive transcriptional regulator InbR

Data table header descriptions
ID Agilent probe name
NAME NAME
CONTROL_TYPE Control type
REFSEQ Refsequence
GB ACC GeneBankAccession
ORF Locus tag
GENE SYMBOL Gene_Name
GENEID Gene_ID
TARGET_ID TARGETID
ACCESSION_STRING Accession String
CHROMOSOMAL_END Chromosomal End
CHROMOSOMAL_START Chromosomal Start
CHROMOSOME_STRAND Chromosomal Strand
DESCRIPTION Description
SEQUENCE Sequence
SPOT_ID

Data table
ID NAME CONTROL_TYPE REFSEQ GB ACC ORF GENE SYMBOL GENEID TARGET_ID ACCESSION_STRING CHROMOSOMAL_END CHROMOSOMAL_START CHROMOSOME_STRAND DESCRIPTION SEQUENCE SPOT_ID
CUST_1000_PI429112338 CUST_1000_PI429112338 FALSE NC_008769 YP_977119.1 BCG_1024 4697951 1111528-1112160 NC_008769.1|:1111528-1112160 1112160 1111528 + integral membrane protein CTACGCGTGGACTGTACGGATATCACGGCTTGATGATGCTGGCCACAGCCTGGATGTATG
CUST_1001_PI429112338 CUST_1001_PI429112338 FALSE NC_008769 YP_977120.1 BCG_1025c echA7 4696218 c1113060-1112251 NC_008769.1|:c1113060-1112251 1113060 1112251 - enoyl-CoA hydratase TGAACTCTCCGCACAACCGCAACGCGCTGTCGAGCACGCTGGTCAGCCAACTACATCAAG
CUST_1002_PI429112338 CUST_1002_PI429112338 FALSE NC_008769 YP_977121.1 BCG_1026c fadE12 4696186 c1114226-1113060 NC_008769.1|:c1114226-1113060 1114226 1113060 - acyl-CoA dehydrogenase fadE12 CGTCGCGACGGCAGCGACTGGATCATCAAGGGCCAGAAAGTCTTTATTTCTGGCATCGAC
CUST_1003_PI429112338 CUST_1003_PI429112338 FALSE NC_008769 YP_977122.1 BCG_1027c accA2 4695874 c1116226-1114223 NC_008769.1|:c1116226-1114223 1116226 1114223 - acetyl-%2Fpropionyl-coenzyme A carboxylase alpha chain subunit alpha accA2 AACACGGGTCAACAGGTCGAAGTAGGCGCCATTCTCGCACGAGTAGAAGCACCTCAAAAT
CUST_1004_PI429112338 CUST_1004_PI429112338 FALSE NC_008769 YP_977123.1 BCG_1028c accD2 4698782 c1117821-1116232 NC_008769.1|:c1117821-1116232 1117821 1116232 - acetyl-%2Fpropionyl-coa carboxylase subunit beta accD2 TACATGGTGGGCAAGGACTACGAGGAAGGCGGGATGATCAAGCATGGCTCGATGATGATC
CUST_1005_PI429112338 CUST_1005_PI429112338 FALSE NC_008769 YP_977124.1 BCG_1029c fadE13 4698803 c1118972-1117824 NC_008769.1|:c1118972-1117824 1118972 1117824 - acyl-coa dehydrogenase fadE13 GTTACATGGCCGAATCCGAAGTCGAACGCCAATACCGGGACATGCGAATCCTCGGTATCG
CUST_1006_PI429112338 CUST_1006_PI429112338 FALSE NC_008769 YP_977125.1 BCG_1030c 4695875 c1120651-1118969 NC_008769.1|:c1120651-1118969 1120651 1118969 - hypothetical protein GTCACCCGTCACGTGCTGCCGAATCTGCGGGCACTGAACTTCGTCATCGAGGCAATCCTC
CUST_1007_PI429112338 CUST_1007_PI429112338 FALSE NC_008769 YP_977126.1 BCG_1031 PE_PGRS16 4696955 1120850-1123621 NC_008769.1|:1120850-1123621 1123621 1120850 + PE-PGRS family protein CTGACCTACAACTACAACACCTACTCAACGACGGTGGATTTCGGCAATGGCCTTCTCACC
CUST_1008_PI429112338 CUST_1008_PI429112338 FALSE NC_008769 YP_977127.1 BCG_1032c PE_PGRS17 4697798 c1124845-1123838 NC_008769.1|:c1124845-1123838 1124845 1123838 - PE-PGRS family protein CTGGTCTTCGTGACCAACTTCGACAGCAACACGGTGTCGGTGATCGACCCGACCACCAAC
CUST_1009_PI429112338 CUST_1009_PI429112338 FALSE NC_008769 YP_977128.1 BCG_1033c 4697719 c1125353-1125159 NC_008769.1|:c1125353-1125159 1125353 1125159 - hypothetical protein GACAATCGCGTCGACAATGACGTGGAGGATACCGGTTGAAGACGGCCCGGCCCAATTCCG
CUST_100_PI429112338 CUST_100_PI429112338 FALSE NC_008769 YP_976219.1 BCG_0116 4697023 120141-122069 NC_008769.1|:120141-122069 122069 120141 + oxidoreductase TATTCGACGACCGAGAACATGGGCCTGATCACGCTGGCGCTCGGTGCGGCAACACTTTTC
CUST_1010_PI429112338 CUST_1010_PI429112338 FALSE NC_008769 YP_977129.1 BCG_1034 rpmF 4696844 1125375-1125548 NC_008769.1|:1125375-1125548 1125548 1125375 + 50S ribosomal protein L32 CACAAGGTGCCTCGGCGCTTGCTCAAGGCCGCCCGGCTCGGCCTCATCGATTTCGATAAG
CUST_1011_PI429112338 CUST_1011_PI429112338 FALSE NC_008769 YP_977130.1 BCG_1035c PE_PGRS18 4696786 c1126940-1125567 NC_008769.1|:c1126940-1125567 1126940 1125567 - PE-PGRS family protein GTCAACCCAGGCGGCAACATCTACGTCACCAACCAGTTCAGCAACACGGTGTCGGTGATC
CUST_1012_PI429112338 CUST_1012_PI429112338 FALSE NC_008769 YP_977131.1 BCG_1036 mprA 4697720 1127305-1127997 NC_008769.1|:1127305-1127997 1127997 1127305 + two component response transcriptional regulatory protein MprA TATCCTGGAAGAGGTATGGGGATTCGACTTTCCCACCTCGGGCAACGCGCTGGAAGTCTA
CUST_1013_PI429112338 CUST_1013_PI429112338 FALSE NC_008769 YP_977132.1 BCG_1037 mprB 4696126 1127997-1129511 NC_008769.1|:1127997-1129511 1129511 1127997 + two component sensor kinase mprB GATATCCATTTCGACGTCGAGGTGATTGGGTGGCAGGTTTATGGCGATACCGCTGGATTG
CUST_1014_PI429112338 CUST_1014_PI429112338 FALSE NC_008769 YP_977133.1 BCG_1038 4696127 1129555-1130949 NC_008769.1|:1129555-1130949 1130949 1129555 + serine protease CTGGGTGTGCAGGTGACCAATGACAAAGACACCCCGGGCGCCAAGATCGTCGAAGTAGTG
CUST_1015_PI429112338 CUST_1015_PI429112338 FALSE NC_008769 YP_977134.1 BCG_1039 moaB2 4695982 1130949-1131494 NC_008769.1|:1130949-1131494 1131494 1130949 + pterin-4-alpha-carbinolamine dehydratase moaB2 AGTGTTCAAAGCTCGGATATACGGTGGCACCCATGGAACAGCGTGCGGAGTTGGTGGTTG
CUST_1016_PI429112338 CUST_1016_PI429112338 FALSE NC_008769 YP_977135.1 BCG_1040c mscL 4695603 c1131969-1131514 NC_008769.1|:c1131969-1131514 1131969 1131514 - large-conductance mechanosensitive channel GTGGTCAGACCATTGACTTGAACGTCTTGTTGTCGGCAGCGATCAACTTTTTCCTGATCG
CUST_1017_PI429112338 CUST_1017_PI429112338 FALSE NC_008769 YP_977136.1 BCG_1041 4697734 1132292-1133038 NC_008769.1|:1132292-1133038 1133038 1132292 + adhesion component transport atp-binding protein ABC transporter AATTTTTCAACCTGATTCCCACTCTTACCGTGTTGGAAAATATTACGCTGCCTCAGGAAC
CUST_1018_PI429112338 CUST_1018_PI429112338 FALSE NC_008769 YP_977137.1 BCG_1042 4695392 1133031-1135598 NC_008769.1|:1133031-1135598 1135598 1133031 + adhesion component transport transmembrane protein TCGGGAAGACATTGTTATTCAATCGACTCATAGTGTCCGCGAAGCATCAATGGTCATATT

Total number of rows: 3995

Table truncated, full table size 905 Kbytes.




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