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Platform GPL24575 Query DataSets for GPL24575
Status Public on Dec 31, 2018
Title Agilent-035108 DMS-JXY [Probe name version]
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
Description 1598/2139/251/508

Arrays of this design have barcodes that begin with 16035108 or 2535108.

The 4×180K format targeting amplified regions was customized microarray that we created by using the Agilent eArray online system (https://earray.chem.agilent.com/?) for interrogating the genome of Double minutes (DMs) with high-resolution and accuracy.
 
Submission date Feb 02, 2018
Last update date Dec 31, 2018
Contact name Xueyuan Jia
E-mail(s) [email protected]
Organization name Harbin Medical University
Lab Laboratory of Medical Genetics
Street address 157 Baojian Road, Nangang District
City Harbin
ZIP/Postal code 150081
Country China
 
Samples (1) GSM2977273
Series (2)
GSE110070 Identified amplification regions by high-density array CGH in a human colorectal adenocarcinoma cell line NCI-H716 [custom 180K]
GSE110071 Identified amplification regions by high-density array CGH in a human colorectal adenocarcinoma cell line NCI-H716

Data table header descriptions
ID Spot identifier
CONTROL_TYPE Control type
GB_ACC GenBankAccession
GENE_SYMBOL Gene Symbol
GENE_NAME Gene Name
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND Cytoband
DESCRIPTION Description

Data table
ID CONTROL_TYPE GB_ACC GENE_SYMBOL GENE_NAME ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION
HsCGHBrightCorner pos
DarkCorner2 pos
A_16_P19984088 FALSE chr14:26022028-26022087 hs|q12
A_18_P11748595 FALSE chr13:54914014-54914073 hs|q14.3
A_16_P57132231 FALSE chr14:28665056-28665115 hs|q12
A_16_P59984349 FALSE NM_130391 PTPRD protein tyrosine phosphatase, receptor type, D ref|NM_130391|ref|NM_002839 chr9:9626352-9626408 hs|p23 Homo sapiens protein tyrosine phosphatase, receptor type, D (PTPRD), transcript variant 2, mRNA.
A_16_P03252776 FALSE NM_199262 SP6 Sp6 transcription factor ref|NM_199262 chr17:45931922-45931981 hs|q21.32 Homo sapiens Sp6 transcription factor (SP6), mRNA.
A_18_P11947167 FALSE chr14:30491401-30491460 hs|q12
A_16_P56987141 FALSE chr13:32130345-32130404 hs|q12.3
A_16_P59941135 FALSE BC070152 gb|BC070152|gb|BC026098 chr8:130563131-130563190 hs|q24.21 Homo sapiens coiled-coil domain containing 26, mRNA (cDNA clone IMAGE:4305364).
A_16_P02018274 FALSE chr8:127648798-127648857 hs|q24.21
A_18_P19961191 FALSE chr14:32362532-32362576 hs|q12
A_16_P59928257 FALSE chr8:123667890-123667949 hs|q24.13
A_18_P19978024 FALSE chr14:36527826-36527885 hs|q13.2
A_18_P19949392 FALSE chr14:28944262-28944321 hs|q12
A_16_P16196706 FALSE NM_015460 MYRIP myosin VIIA and Rab interacting protein ref|NM_015460 chr3:39948160-39948219 hs|p22.1 Homo sapiens myosin VIIA and Rab interacting protein (MYRIP), mRNA.
A_16_P19995895 FALSE chr14:30965211-30965270 hs|q12
A_16_P20016598 FALSE AF338234 gb|AF338234 chr14:39840706-39840765 hs|q21.1 Homo sapiens CTAGE-5B protein mRNA, complete cds, alternatively spliced.
A_16_P18485001 FALSE chr8:129973604-129973663 hs|q24.21
A_16_P57138354 FALSE NM_004274 AKAP6 A kinase (PRKA) anchor protein 6 ref|NM_004274 chr14:32831582-32831641 hs|q12 Homo sapiens A kinase (PRKA) anchor protein 6 (AKAP6), mRNA.

Total number of rows: 170159

Table truncated, full table size 22165 Kbytes.




Download family Format
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Supplementary file Size Download File type/resource
GPL24575_035108_D_GEO_20110627.txt.gz 6.3 Mb (ftp)(http) TXT

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