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Platform GPL2526 Query DataSets for GPL2526
Status Public on Jun 15, 2005
Title Yale 9.2K arabidopsis array
Technology type spotted DNA/cDNA
Distribution commercial
Organism Vitis riparia
Manufacturer W.M Keck Foundation Biotechnology Resource Lab, Yale university
Manufacture protocol http://keck.med.yale.edu/dnaarrays/printing.htm
Catalog number AR9.2K
 
 
Contributor(s) Fennell AY, Horvath DP
Submission date Jun 07, 2005
Last update date Jul 28, 2005
Contact name Anne Y Fennell
E-mail(s) [email protected]
Phone 605-688-6373
Fax 605-688-4452
Organization name South Dakota State University
Department Plant Science
Lab Fruit Crops Research
Street address 201 N. Campus Dr
City Brookings
State/province SD
ZIP/Postal code 57007
Country USA
 
Samples (2) GSM60618, GSM60691
Series (1)
GSE3052 Photoperiod induction of endodormancy in Vitis riparia axillary buds.

Data table header descriptions
ID
GB_ACC Genbank accession number
SPOT_ID
clone ID on AFGC chips alphanumeric clone code used by the Arabidopsis Functional Genomics Consortium
TIGR locus AtG code for Arabidopsis genes
Function Top BlastX hit for clones
Yale Clone ID alphanumeric clone code used by the W.M. Keck Center, Yale University

Data table
ID GB_ACC SPOT_ID clone ID on AFGC chips TIGR locus Function Yale Clone ID
1 W43225 248K10T7 AT1g20850 putative cysteine proteinase 248K10T7
2 W43223 202M12T7 AT1g65380 unknown protein 248J18T7
3 W43217 248I16T7_0 No ORF hit 248I16T7
4 W43213 248H22T7_0 AT5g20010 RAN1 small Ras-like GTP-binding 248H22T7
5 W43216 128B7T7_0 AT3g07780 unknown protein 248H6T7
6 W43214 122N18T7_0 AT4g02520 Atpm24.1 glutathione S transferase 248H4T7
7 W43336 103H3T7_0 AT5g15090 voltage-dependent anion-selective channel protein hsr2 250A8T7
8 W43334 221K22T7_0 AT5g23060 putative protein 250A3T7
9 W43289 249K4T7_1 No ORF hit 249K4T7
10 W43283 196G18T7 AT3g47460 CHROMOSOME ASSEMBLY PROTEIN XCAP-E - Xenopus 249J10T7
11 W43286 97O14T7_0 AT5g07460 peptide methionine sulfoxide reductase-like protein 249J3T7
12 W43082 144O8T7 AT2g45820 remorin;identical to GB:M25268, a non-specific DNA binding protein; may be involved in intercellular communication 249I24T7
13 W43281 249F9T7_0 At2g03070 unknown protein 249F9T7
14 W43271 249E23T7_1 AT5g66400 dehydrin RAB18-like protein 249E23T7
15 W43276 249E9T7_1 No hits found 249E9T7
16 W43199 248E9T7_0 No ORF hit 248E9T7
17 W43181 276F3T7 AT1g02780 similar to ribosomal protein L19 GI:36127 from (Homo sapiens) 248E6T7
18 W43174 248D13T7_0 No ORF hit 248D13T7
19 W43048 137O24T7_0 AT5g07440 glutamate dehydrogenase 2 248A23T7
20 W43046 248A15T7_5 No hits found 248A15T7

Total number of rows: 18432

Table truncated, full table size 1128 Kbytes.




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