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Platform GPL30211 Query DataSets for GPL30211
Status Public on Nov 01, 2021
Title Agilent-069048 Bifidobacterium bifidum 0140801_Bbi [Probe Name version]
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Bifidobacterium bifidum
Manufacturer Agilent Technologies
Manufacture protocol see manufacturer's web site at http://www.agilent.com/
 
Description Arrays of this design have barcodes that begin with 16069048 or 2569048.

Orientation:

The ID column represents the Agilent Probe Name.

A different version of this platform with the Agilent Feature Extraction feature numbers in the ID column is assigned accession number GPL30164.
 
Submission date May 31, 2021
Last update date May 31, 2021
Contact name Eiji Ishikawa
E-mail(s) [email protected]
Phone +81-42-577-8960
Organization name Yakult Central Institute
Street address Izumi 5-11
City Kunitachi
State/province Tokyo
ZIP/Postal code 186-8650
Country Japan
 
Samples (8) GSM5349886, GSM5349887, GSM5349888, GSM5349889, GSM5349890, GSM5349891 
Series (1)
GSE175843 Effects of housekeeping sortase disruption on Bifidibacterium bifidum toranscriptome

Data table header descriptions
ID Agilent Probe Name
SPOT_ID Spot identifier
CONTROL_TYPE Control type
ACCESSION_STRING Accession String
CHROMOSOMAL_LOCATION Chromosomal Location.Bbi_YIT10347_1_1 .gbk
CYTOBAND Cytoband
DESCRIPTION Description
SEQUENCE Sequence

Data table
ID SPOT_ID CONTROL_TYPE ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION SEQUENCE
CUST_1000_PI429890411 CUST_1000_PI429890411 FALSE Bbi_CDS0985 chr1:1349481-1349540 L-serine ammonia-lyase ATCGCCACGATGAAGCAGACCGGCGAGGACATGATGTCGAAATACAAGGAGACCTCGAAG
CUST_1001_PI429890411 CUST_1001_PI429890411 FALSE Bbi_CDS0986 chr1:1349872-1349931 peptidyl-prolyl cis-trans isomerase GTGACCGTGAACTATCACGGTGTGGTCTGGGGCAAGAACACACCCTTCGATTCGAGCTTC
CUST_1002_PI429890411 CUST_1002_PI429890411 FALSE Bbi_CDS0987 chr1:1350197-1350256 transcription elongation factor greA ATGGGTGAGGAAAAATCCGTTCTGCTGACGCAGGAGGCTTTCGACACGCTGAAGGATGAG
CUST_1003_PI429890411 CUST_1003_PI429890411 FALSE Bbi_CDS0988 chr1:1352330-1352389 Hypothetical protein BBPR_0720 GATACATTGATCTCACCAAAGTAGGAGAATCCTCCAACGTCGCGGTGAATGAGTTTCTTG
CUST_1004_PI429890411 CUST_1004_PI429890411 FALSE Bbi_CDS0989 chr1:1353493-1353434 "Hly-III family protein,Blon_1775, PFAM: Hly-III family protein; KEGG: blo:BL1014 hypothetical protein: BbrY0742: BAD_0653" TTGTATACCGTCGTCTACATCGTGTTCGGAGTCTCCGGCGTGGCGTTCATGTACTTCTTC
CUST_1005_PI429890411 CUST_1005_PI429890411 FALSE Bbi_CDS0990 chr1:1355280-1355339 Sensory transduction protein kinase GATGAGATCGTCGATTTCGACAAGGTCATCTCCAACCTGCTGAAGATGAGCGTCGACTTG
CUST_1006_PI429890411 CUST_1006_PI429890411 FALSE Bbi_CDS0991 chr1:1356014-1355955 cell division transcription factor WhmD CAAGGTGATTGACGCCTGTCTGAAGTGCGCGTTGGACACCAATCAGGATTATGGTGTCTG
CUST_1007_PI429890411 CUST_1007_PI429890411 FALSE Bbi_CDS0992 chr1:1356471-1356412 "cell division protein, FtsK/SpoIIIE" CGTGGAGACCTCCAAGCACATCCGAATCCCCGAGCATTGCGGCACGAGAATAGTCTTCCC
CUST_1008_PI429890411 CUST_1008_PI429890411 FALSE Bbi_CDS0993 chr1:1358612-1358553 transcriptional regulator GAAACTCAACAAGACGCTGAAAGCCGCTTTGGCGTCCATCACCGTCGATTCCAAGACGAA
CUST_1009_PI429890411 CUST_1009_PI429890411 FALSE Bbi_CDS0994 chr1:1360165-1360224 transcription factor WhiB GACGATGTTTCCTGGCAGCATAAGGCCCTGTGCTCCCAGACCGATCCGGAAGCTTTTTTC
CUST_100_PI429890411 CUST_100_PI429890411 FALSE Bbi_CDS0099 chr1:124039-123980 UDP-N-acetylenolpyruvoylglucosamine reductase CTGCCGACATGGGATTCGGATACCGTATGAGCGCTCTCAAGACGAGCATGTATCAGGCTC
CUST_1010_PI429890411 CUST_1010_PI429890411 FALSE Bbi_CDS0995 chr1:1363330-1363389 regulatory protein GAACAGTTGATTTCGAACATCACGGCGAGTGAGGGTATCCAATCCGTGGTGAGTAACACG
CUST_1011_PI429890411 CUST_1011_PI429890411 FALSE Bbi_CDS0996 chr1:1364782-1364841 "conserved hypothetical protein,Blon_1768, KEGG: blo:BL1006 hypothetical protein: BbrY0749: BAD_0661" TGGTGAACGCGTCTTTATCCAGCAAACAGATGCACATGACCGGTTACGACGACAAGGGTG
CUST_1012_PI429890411 CUST_1012_PI429890411 FALSE Bbi_CDS0997 chr1:1365302-1365243 "conserved hypothetical protein,Blon_1767, KEGG: blo:BL1005 hypothetical protein: BbrY0750: BAD_0662" ATCGTGCTGTACCGCATGCCGATACAGAGCAAATCACGCAGCCGCATGGATCTGGAACTG
CUST_1013_PI429890411 CUST_1013_PI429890411 FALSE Bbi_CDS0998 chr1:1365767-1365826 Phosphomannomutase CTCCAAACAACCGATGAAACCGGATATGACCGTTCGCATCGAGGCGCTGACCGAACTGAT
CUST_1014_PI429890411 CUST_1014_PI429890411 FALSE Bbi_CDS0999 chr1:1366715-1366774 amidophosphoribosyl transferase-like protein GATACTGCGATGGAAGGATCATGGCGACGAGGAATGCGATGGCCCGTTCGCCGATATGAT
CUST_1015_PI429890411 CUST_1015_PI429890411 FALSE Bbi_CDS1000 chr1:1367658-1367599 peptidase S24-like domain GAGGAGGGCTTCAGCCTTGACGCTCATGTGATCGAGCACCCGGAATACACATTCATCGTC
CUST_1016_PI429890411 CUST_1016_PI429890411 FALSE Bbi_CDS1001 chr1:1368059-1368000 signal transduction histidine- protein kinase GTCACGAATGTGGTGAATTTCGGGTCTCAGATTCCCGTCGAGGAACGTTCCGACATCTTC
CUST_1017_PI429890411 CUST_1017_PI429890411 FALSE Bbi_CDS1002 chr1:1369612-1369553 two-component response regulator ATGATTAATTCTCCAACACGTCAAACGACGCCGCGGACCATTCTGGTGGTCGAGGATGAG
CUST_1018_PI429890411 CUST_1018_PI429890411 FALSE Bbi_CDS1003 chr1:1370300-1370241 "GlgB 1,4-alpha-glucan branching enzyme" AAATGGCACCACAACGAGATCACCTTCTCGATGGTGTACGCCTATTCGGAGCATTACGTG

Total number of rows: 1696

Table truncated, full table size 306 Kbytes.




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