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Platform GPL5339 Query DataSets for GPL5339
Status Public on Sep 01, 2007
Title Mm_FCRF_UniGEM2
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Mus musculus
Manufacturer NCI-Frederick/LMT
Manufacture protocol Printing by the NCI-Frederick/LMT Microarray Research Facility with BioRobotics TAS II robotic arrayer from Genomic Solutions (http://www.genomicsolutions.com) on Fisher Premium microscope slides coated with poly-L-lysine and post-processed according to the procedures on the NCI website http://nciarray.nci.nih.gov/. http://nciarray.nci.nih.gov/reference/NCIReference.shtml
Support glass
Coating polysine
 
Description The mouse cDNA probe set is based on 9984 PCR products from Incyte's mouse UniGEM 2.0 library (http://www.incyte.com).
 
Web link http://nciarray.nci.nih.gov/
Contributor(s) Deeb KK, Michalowska AM, Yoon C, Krummey SM, Hoenerhoff MJ, Kavanaugh C, Li M, Demayo FJ, Linnoila I, Deng C, Lee EH, Medina D, Shih JH, Green JE
Submission date May 29, 2007
Last update date Jan 18, 2013
Contact name Jeffrey E Green
E-mail(s) [email protected]
Phone 3014355193
Fax 3014968709
Organization name NCI
Street address Rm 4054, 37 Convent Drive
City Bethesda
State/province MD
ZIP/Postal code 20892
Country USA
 
Samples (73) GSM214827, GSM214828, GSM214829, GSM214830, GSM214831, GSM214832 
Series (3)
GSE8662 Integrated SV40 T/t-antigen Cancer Signature in Aggressive Breast, Prostate and Lung Carcinomas with Poor Prognosis 1
GSE8663 Integrated SV40 T/t-antigen Cancer Signature in Aggressive Breast, Prostate and Lung Carcinomas with Poor Prognosis 2
GSE8666 Integrated SV40 T/t-antigen Cancer Signature in Aggressive Breast, Prostate and Lung Carcinomas with Poor Prognosis

Data table header descriptions
ID
MADB_WELL_ID NCI mAdb well identifier
CLONE_ID Incyte clone identifier
GENE Gene symbol
UNIGENE UniGene identifier
DESCRIPTION Gene description
ENTREZ_ID Entrez Gene identifier
SPOT_ID spot identifier

Data table
ID MADB_WELL_ID CLONE_ID GENE UNIGENE DESCRIPTION ENTREZ_ID SPOT_ID
641311_1 641311 IMAGE:313176 Ppara Mm.212789 Peroxisome proliferator activated receptor alpha, mRNA (cDNA clone MGC:18607 IMAGE:4222384) 105781
641312_1 641312 IMAGE:539908 Mrpl27 Mm.34951 Mitochondrial ribosomal protein L27, mRNA (cDNA clone MGC:41411 IMAGE:1514322) 52517
641313_1 641313 IMAGE:313156 Unknown
641314_1 641314 IMAGE:540258 Arts1 Mm.83526 Type 1 tumor necrosis factor receptor shedding aminopeptidase regulator (Arts1), mRNA 80898
641315_1 641315 IMAGE:314211 AW551984 Mm.208855 Expressed sequence AW551984, mRNA (cDNA clone MGC:74355 IMAGE:30250574) 244810
641316_1 641316 IMAGE:540466 Ndnl2 Mm.19944 Necdin-like 2, mRNA (cDNA clone MGC:41406 IMAGE:1494952) 66647
641317_1 641317 IMAGE:315069 E130106K10Rik Mm.227117 PREDICTED: similar to solute carrier family 30 (zinc transporter), member 10 isoform a [Mus musculus], mRNA sequence 226781
641318_1 641318 IMAGE:540673 Phf6 Mm.26870 PHD finger protein 6, mRNA (cDNA clone MGC:67335 IMAGE:6826091) 70998
641319_1 641319 IMAGE:315392 2500002K03Rik Mm.29181 2-deoxyribose-5-phosphate aldolase homolog (C. elegans), mRNA (cDNA clone MGC:28759 IMAGE:4484163) 232449
641320_1 641320 IMAGE:539514 BC058674 Mm.219137 CDNA sequence BC058674, mRNA (cDNA clone MGC:32383 IMAGE:5036822) 233210
641321_1 641321 IMAGE:314814 D230004J03Rik Mm.211030 RIKEN cDNA D230004J03 gene, mRNA (cDNA clone IMAGE:30479975) 194388
641322_1 641322 IMAGE:539758 Uchl5 Mm.261004 Ubiquitin carboxyl-terminal esterase L5, mRNA (cDNA clone MGC:6295 IMAGE:2650799) 56207
641323_1 641323 IMAGE:317393 Notch4 Mm.173813 Notch gene homolog 4 (Drosophila) (Notch4), mRNA 18132
641324_1 641324 IMAGE:539104 Rhoe Mm.46497 Rho family GTPase 3, mRNA (cDNA clone MGC:6381 IMAGE:3500586) 74194
641325_1 641325 IMAGE:438498 Mm.380218 PREDICTED: Mus musculus similar to Dystrobrevin beta (Beta-dystrobrevin) (DTN-B) (MDTN-B) (LOC546556), mRNA 13528
641326_1 641326 IMAGE:539212 Stk33 Mm.253614 Serine/threonine kinase 33 (Stk33 gene) 74293
641327_1 641327 IMAGE:427435 Cav3 Mm.3924 Caveolin 3, mRNA (cDNA clone MGC:36120 IMAGE:4988598) 12391
641328_1 641328 IMAGE:539308 Unknown
641329_1 641329 IMAGE:438308 Ap3s2 Mm.220173 Adaptor-related protein complex 3, sigma 2 subunit, mRNA (cDNA clone IMAGE:3709410) 11778
641330_1 641330 IMAGE:538698 Zfp143 Mm.10815 Zinc finger protein 143, mRNA (cDNA clone MGC:46861 IMAGE:5356405) 20841

Total number of rows: 9984

Table truncated, full table size 1066 Kbytes.






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