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Platform GPL6023 Query DataSets for GPL6023
Status Public on Feb 11, 2008
Title Custom Tiling array of 920 regions (HG18)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Homo sapiens
Manufacturer NimbleGen
Manufacture protocol see NimbleGen website
 
 
Contributor(s) Kraus WL, Krishnakumar R, Gamble MJ
Submission date Oct 20, 2007
Last update date Feb 11, 2008
Contact name W. Lee Kraus
E-mail(s) [email protected]
Organization name UT Southwestern Medical Center
Street address 5323 Harry Hines Blvd.
City Dallas
State/province TX
ZIP/Postal code 75390-8511
Country USA
 
Samples (9) GSM239061, GSM239062, GSM239063, GSM239064, GSM239374, GSM242988 
Series (3)
GSE9417 PARP-1 and H1 custom ChIP-chip
GSE9607 MacroH2A1 ChIP-chip
GSE22254 PELP1 ChIP-chip from MCF-7 cells

Data table header descriptions
ID
type Block1 or Random
region 920 tiled regions
position chromosomal position
GB_RANGE RefSeq accession with [start..end] probe coordinates (based on HG18, NCBI Build 36)
SPOT_ID identifies RANDOM probes

Data table
ID type region position GB_RANGE SPOT_ID
CHR4P171243035 BLOCK1 AADAT chr4_171242758_171272758 171243035 NC_000004.10[171242758..171272758]
CHR4P171243113 BLOCK1 AADAT chr4_171242758_171272758 171243113 NC_000004.10[171242758..171272758]
CHR4P171243191 BLOCK1 AADAT chr4_171242758_171272758 171243191 NC_000004.10[171242758..171272758]
CHR4P171243269 BLOCK1 AADAT chr4_171242758_171272758 171243269 NC_000004.10[171242758..171272758]
CHR4P171243347 BLOCK1 AADAT chr4_171242758_171272758 171243347 NC_000004.10[171242758..171272758]
CHR4P171243425 BLOCK1 AADAT chr4_171242758_171272758 171243425 NC_000004.10[171242758..171272758]
CHR4P171243530 BLOCK1 AADAT chr4_171242758_171272758 171243530 NC_000004.10[171242758..171272758]
CHR4P171243608 BLOCK1 AADAT chr4_171242758_171272758 171243608 NC_000004.10[171242758..171272758]
CHR4P171243999 BLOCK1 AADAT chr4_171242758_171272758 171243999 NC_000004.10[171242758..171272758]
CHR4P171244077 BLOCK1 AADAT chr4_171242758_171272758 171244077 NC_000004.10[171242758..171272758]
CHR4P171244155 BLOCK1 AADAT chr4_171242758_171272758 171244155 NC_000004.10[171242758..171272758]
CHR4P171244233 BLOCK1 AADAT chr4_171242758_171272758 171244233 NC_000004.10[171242758..171272758]
CHR4P171244311 BLOCK1 AADAT chr4_171242758_171272758 171244311 NC_000004.10[171242758..171272758]
CHR4P171244389 BLOCK1 AADAT chr4_171242758_171272758 171244389 NC_000004.10[171242758..171272758]
CHR4P171244467 BLOCK1 AADAT chr4_171242758_171272758 171244467 NC_000004.10[171242758..171272758]
CHR4P171244545 BLOCK1 AADAT chr4_171242758_171272758 171244545 NC_000004.10[171242758..171272758]
CHR4P171244623 BLOCK1 AADAT chr4_171242758_171272758 171244623 NC_000004.10[171242758..171272758]
CHR4P171244701 BLOCK1 AADAT chr4_171242758_171272758 171244701 NC_000004.10[171242758..171272758]
CHR4P171244779 BLOCK1 AADAT chr4_171242758_171272758 171244779 NC_000004.10[171242758..171272758]
CHR4P171244857 BLOCK1 AADAT chr4_171242758_171272758 171244857 NC_000004.10[171242758..171272758]

Total number of rows: 389307

Table truncated, full table size 36165 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL6023_2007_01_08_WLK_HG18_ChIP.pos.gz 5.5 Mb (ftp)(http) POS

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