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Platform GPL6373 Query DataSets for GPL6373
Status Public on Dec 30, 2008
Title Boophilus microplus EST microarray (NimbleGen)
Technology type in situ oligonucleotide
Distribution custom-commercial
Organism Rhipicephalus microplus
Manufacturer NimbleGen Systems Inc.
Manufacture protocol www.nimblegen.com
 
 
Submission date Jan 14, 2008
Last update date Dec 30, 2008
Contact name Leonel (Leo) Saldivar
E-mail(s) [email protected]
Phone 830.792.0366
Organization name USDA
Department Agriculture
Lab Agriculture Research Service
Street address 2700 Fredericksburg Rd.
City Kerrville
State/province TX
ZIP/Postal code 78028
Country USA
 
Samples (44) GSM257121, GSM257122, GSM257123, GSM257124, GSM257125, GSM257126 
Series (2)
GSE10171 Microarray analysis of gene expression in acaricide exposed Rhipicephalus (Boophilus) microplus.
GSE10816 Microarray analysis of expressed genes from R. microplus larvae, adult ovary, adult female gut associated with B bovis.
Relations
Alternative to GPL10125

Data table header descriptions
ID
GB_ACC GenBank Accession number
SPOT_ID
GENE_INFO B. microplus Gene Index identifier
GENE_INFO_extended
SEQUENCE All Tentative consensus have a unique oligonucleotide sequence assoicated with it.

Data table
ID GB_ACC SPOT_ID GENE_INFO GENE_INFO_extended SEQUENCE
BMICRO00S00000966 Tentative Consensus TC5761 TC5761 966|TC5761|2005-06-08|BraytonBMESTsfasta.txt
BMICRO00S00000967 Tentative Consensus TC5762 TC5762 967|TC5762|2005-06-08|BraytonBMESTsfasta.txt GTCCGCCATGGTTTATTCTTTGAAAAGAAATATTCCGTGTTCACGCGAGAAATCACGAGACTTGAAGTTG
BMICRO00S00000969 Tentative Consensus TC5764 TC5764 969|TC5764|2005-06-08|BraytonBMESTsfasta.txt AAGATCAAGCGTTCCTTTGTTCAGCCTGTGAAGTCTTTCCTGTTTCCTATACTCGAGCGAAACCAAGTTT
BMICRO00S00000970 Tentative Consensus TC5765 TC5765 970|TC5765|2005-06-08|BraytonBMESTsfasta.txt GAAGACTGCACTTGTAAAGACGTGTTTGTTGCCCAACCACGTGAAGACATGCGTGATTGCGCTTTATGCG
BMICRO00S00000971 Tentative Consensus TC5766 TC5766 971|TC5766|2005-06-08|BraytonBMESTsfasta.txt GCGTAGCCTGTGTATATCTATACACACATACGTAACTTAACCTTTTTGCGTTTTAGCCGTATTTCCTTCT
BMICRO00S00000972 Tentative Consensus TC5767 TC5767 972|TC5767|2005-06-08|BraytonBMESTsfasta.txt TGTTGTGAACCTTCTAACTTCGACTCCGAGCTCCTTCACTCTTCCACTGACTTTTACAGTGCAAACTATT
BMICRO00S00000973 Tentative Consensus TC5768 TC5768 973|TC5768|2005-06-08|BraytonBMESTsfasta.txt GAATAACGTCAACGTAAGCAATTTAGCTTCCTCACCCGGAACGCAAGTAAAGCCAAAAGTGTCACTGTTT
BMICRO00S00000974 Tentative Consensus TC5769 TC5769 974|TC5769|2005-06-08|BraytonBMESTsfasta.txt TTAAAAAACATCGAGTGACAAGTACCCACCCTCCCCAATCGCTCAGAGTATGTTGGACAAATAAAAAGAA
BMICRO00S00000975 Tentative Consensus TC5770 TC5770 975|TC5770|2005-06-08|BraytonBMESTsfasta.txt GCTTATTGCAAGGTTGTTTTCCTAGGCACCTATTTGAGCCAAGAGGAACTTGAATAAACAGATTTTTAAT
BMICRO00S00000976 Tentative Consensus TC5771 TC5771 976|TC5771|2005-06-08|BraytonBMESTsfasta.txt TATTTGGGAACCCACAAGTTCTTTGCTGGGGACAATCTCACCTATGTTGACTTCATTGCTTACGAGATGC
BMICRO00S00000977 Tentative Consensus TC5772 TC5772 977|TC5772|2005-06-08|BraytonBMESTsfasta.txt TGGGGCGACGTGTACGAAAGACGGCAAGCGAATGATTCACGCTTGTTCCAACTTCACCTCAAAAGTCAGC
BMICRO00S00000978 Tentative Consensus TC5773 TC5773 978|TC5773|2005-06-08|BraytonBMESTsfasta.txt TGCCTAGTGTATCGCAGGACTACTTATGCCCCTGTTTTCAGACATTGAACCGATTTCTGGTTCCGTTGGT
BMICRO00S00000979 Tentative Consensus TC5774 TC5774 979|TC5774|2005-06-08|BraytonBMESTsfasta.txt TACACCGCATGAGACTGCATTTCATACAGCAATATGAGAGCGTATACAAGAGAATTTCACCCTGTTTTGT
BMICRO00S00000980 Tentative Consensus TC5775 TC5775 980|TC5775|2005-06-08|BraytonBMESTsfasta.txt GCGCACTGTGGACAATACAGAACCGAATTGGATGCCTTATACCACAAAAATAGTACTTATGTTTATTAAT
BMICRO00S00000981 Tentative Consensus TC5776 TC5776 981|TC5776|2005-06-08|BraytonBMESTsfasta.txt GCACATGTTGCACTCTAAGACACCATATTGTGATCCTTGTGCAATTTTACTATTGTAATTGTTATAGCAG
BMICRO00S00000982 Tentative Consensus TC5777 TC5777 982|TC5777|2005-06-08|BraytonBMESTsfasta.txt TACCACGCCACCCAAGGAGAAATACGAACAACGACGAATTGAAATAAACGACGAAACGTGCTGCAATGCA
BMICRO00S00000983 Tentative Consensus TC5778 TC5778 983|TC5778|2005-06-08|BraytonBMESTsfasta.txt AGGCAGGTGACTACCTCTACCTGAAGCTGTCCAGAACGAAGAGAAGCACCGAAGAAATAGTCTACTAATC
BMICRO00S00000984 Tentative Consensus TC5779 TC5779 984|TC5779|2005-06-08|BraytonBMESTsfasta.txt TACTTGCCTTCCAAAATTGCGGGCCTCGTGCGTTACCTCATGAAGCGGGGTGTTGCCACCGTCGGAGTCG
BMICRO00S00000985 Tentative Consensus TC5780 TC5780 985|TC5780|2005-06-08|BraytonBMESTsfasta.txt TTTCTATTTTTCAATAAATGCACGACCGTAGTATGGGACAAGCCCCGTTGCAGTGCACGTAAGACCACAA
BMICRO00S00000986 Tentative Consensus TC5781 TC5781 986|TC5781|2005-06-08|BraytonBMESTsfasta.txt CAGGAGCACAGACCTTTCTTCGAGACTTCGCTTCCACGCTGCAACGGTCGTCCCTTTGAATGTGCTGCTG

Total number of rows: 13601

Table truncated, full table size 1939 Kbytes.




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