NCBI Logo
GEO Logo
   NCBI > GEO > Accession DisplayHelp Not logged in | LoginHelp
GEO help: Mouse over screen elements for information.
          Go
Platform GPL6697 Query DataSets for GPL6697
Status Public on Apr 08, 2008
Title Print_1355
Technology type spotted DNA/cDNA
Distribution non-commercial
Organism Homo sapiens
Manufacturer Stanford Functional Genomics Facility, Stanford School of Medicine
Manufacture protocol Material is transferred from microtiter plate wells to the slide surface by an automated print head
Support glass
 
 
Submission date Apr 07, 2008
Last update date Apr 08, 2008
Contact name Daniel Hogan
Organization name Stanford University
Street address 279 Campus Dr B439
City Stanford
State/province CA
ZIP/Postal code 94025
Country USA
 
Samples (9) GSM280045, GSM280047, GSM280050, GSM280058, GSM280059, GSM280060 
Series (3)
GSE11079 mRNAs associated with Ago2: Ago2, Ago2+miR-1, Ago2+miR-124, mock transfected
GSE11080 Expression data HEK293T cells transfected with either Ago2, Ago2 + miR-1, Ago2 + miR-124, mock
GSE11082 Identification of mRNAs Recruited to Argonaute 2 by Specific microRNAs and Corresponding Changes in Transcript Abundance

Data table header descriptions
ID
MetaColumn
MetaRow
Column
Row
Reporter Name
Reporter Species
Reporter BioSequence [gcContent]
Reporter BioSequence [length]
Reporter BioSequence [meltingTemp]
SEQUENCE
Repoter Biosequence Type
Repoter BioSequence PolymerType
Reporter Group[role]
Reporter ControlType
CompositeSequence Identifier
CompositeSequence Name
CompositeSequence Biosequence Type
CompositeSequence BioSequence PolymerType
Plate Identifier
Plate Row
Plate Column
LUID
Failed
Contaminated
Sequence Verified
SPOT_ID

Data table
ID MetaColumn MetaRow Column Row Reporter Name Reporter Species Reporter BioSequence [gcContent] Reporter BioSequence [length] Reporter BioSequence [meltingTemp] SEQUENCE Repoter Biosequence Type Repoter BioSequence PolymerType Reporter Group[role] Reporter ControlType CompositeSequence Identifier CompositeSequence Name CompositeSequence Biosequence Type CompositeSequence BioSequence PolymerType Plate Identifier Plate Row Plate Column LUID Failed Contaminated Sequence Verified SPOT_ID
1 1 1 1 1 hSQ025392 Homo sapiens 35.71 70 72 GATTGCACATTGTTGTTTTTTTAATAGTCATTCCAAATATGAGATGCATTGTTACAGGAAGTCCCTTGCC ss_oligo DNA Control control_positive URN:LSID:smd.stanford.edu:geneSymbol:ACTB ACTB gene DNA HOP_1 D 1 844129 0 U U Control
31 1 1 1 2 hSQ042081 Homo sapiens 52.86 70 79 TGTGACAGGGCAAAGCCCAACACCTTCCCCCACTGGATTGACTACAGCAAAGATGCCCAGTGTTCCACTT ss_oligo DNA Control control_tiling URN:LSID:smd.stanford.edu:unigene:Hs.654514 Hs.654514 gene DNA HOP_4 P 1 845569 0 U U Control
61 1 1 1 3 hSQ022406 Homo sapiens 34.29 70 72 GAAACTTTTCCTACATATTAGGCGTTAGTATGAGGACATTTGTTTGAATTATAGAAATTTGCCCTGAGCT ss_oligo DNA Experimental URN:LSID:smd.stanford.edu:locus:57669 57669 gene DNA HOP_8 L 1 847009 0 U U
91 1 1 1 4 hSQ045428 Homo sapiens 37.14 70 73 TTTTGCACAACTGAGAATCCTGCGGCTTGGTTTAATGAGTGTGTTCATGAAATAAATAATGGAGGAATTG ss_oligo DNA Experimental URN:LSID:smd.stanford.edu:unigene:Hs.366053 Hs.366053 gene DNA HOP_12 H 1 848449 0 U U
121 1 1 1 5 hSQ044020 Homo sapiens 28.57 70 69 TTGAGAAGACTAAGTTGTAGCATATATGAGCTTCAAATATAAATGGATTTCAGTTAATAAAGCTGTTCTT ss_oligo DNA Experimental URN:LSID:smd.stanford.edu:geneSymbol:LOC129881 LOC129881 gene DNA HOP_16 D 1 849889 0 U U
151 1 1 1 6 hSQ042554 Homo sapiens 35.71 70 72 TTAAAACTGTGGACTTAAATGTTCTGCAAAGTCTTACACAAAAGCCCAATACAGTACATGAACTACGGAA ss_oligo DNA Experimental URN:LSID:smd.stanford.edu:locus:64770 64770 gene DNA HOP_19 P 1 851329 0 U U
181 1 1 1 7 hSQ023888 Homo sapiens 24.29 70 68 GAGAAAACAAATACTGAAAGTCTCTACTTACATCCAAATTTTAAAAAATAAAATCTGTAGATTAACAATC ss_oligo DNA Experimental URN:LSID:smd.stanford.edu:unigene:Hs.579079 Hs.579079 gene DNA HOP_23 L 1 852769 0 U U
211 1 1 1 8 hSQ001789 Homo sapiens 41.43 70 75 AAGACATACCTGTCAGCCATCACTATTATGACAACAAGCTACCTAAACATGGTTTCCATCAGATGCCCAA ss_oligo DNA Experimental URN:LSID:smd.stanford.edu:geneSymbol:ST8SIA6 ST8SIA6 gene DNA HOP_27 H 1 854209 0 U U
241 1 1 1 9 hSQ039722 Homo sapiens 41.43 70 75 TGAGTCTAGTGCCCCTATTATTAACAATTCCCCCAGAACATGGAAATAACCATTGTTTACAGAGCTGAGC ss_oligo DNA Experimental URN:LSID:smd.stanford.edu:geneName:Glutamate receptor, metabotropic 3 Glutamate receptor, metabotropic 3 gene DNA HOP_31 D 1 855649 0 U U
271 1 1 1 10 hSQ015767 Homo sapiens 47.14 70 77 CCCATGAAATTAGGCGCCTTGTTTGAGCTGCGTTTCACACTTCTTTAGAGCTAGCTGACCTTTGGCCAAA ss_oligo DNA Experimental URN:LSID:smd.stanford.edu:locus:3026 3026 gene DNA HOP_34 P 1 857089 0 U U
301 1 1 1 11 hSQ023799 Homo sapiens 41.43 70 75 GACTGCTTGATTCAGGCTGTTCAAGGTGAAGGATTCATGAGTCTATATAAAGGCTTTTTACCATCTTGGC ss_oligo DNA Experimental URN:LSID:smd.stanford.edu:locus:9481 9481 gene DNA HOP_38 L 1 858529 0 U U
331 1 1 1 12 hSQ027876 Homo sapiens 47.14 70 77 GCTCTCTGAGAAGAGACAGCAAAGCTTCTTAGATGGATCGAAAGACCACGAGCTGGGATACCAAGTTCTA ss_oligo DNA Experimental URN:LSID:smd.stanford.edu:locus:51108 51108 gene DNA HOP_42 H 1 859969 0 U U
361 1 1 1 13 hSQ006142 Homo sapiens 50.00 70 78 AGAGGGTTCGTTTGCTTTCAAAATCCATCTCCCCGTTCCTCTCAGGGTTCTTTGCCCCAAAGGACTTTGC ss_oligo DNA Experimental URN:LSID:smd.stanford.edu:geneSymbol:LOC440596 LOC440596 gene DNA HOP_46 D 1 861409 0 U U
391 1 1 1 14 hSQ019262 Homo sapiens 48.57 70 78 CTATACTATCCAGACGTATGTCTTCCCTGTCACTACTTGCTTGGCACACAGCAATAGCTGCCTCAACCCT ss_oligo DNA Experimental URN:LSID:smd.stanford.edu:locus:339403 339403 gene DNA HOP_49 P 1 862849 0 U U
421 1 1 1 15 hSQ011551 Homo sapiens 44.29 70 76 CAAGAAAAGCCGGCACCAAGAACTTCCATTCTAATCTAGAGCTGACCAGTTTGAGCTGATTCTCTCTTTG ss_oligo DNA Experimental URN:LSID:smd.stanford.edu:unigene:Hs.105269 Hs.105269 gene DNA HOP_53 L 1 864289 0 U U
451 1 1 1 16 hSQ016259 Homo sapiens 38.57 70 74 CCCTCTTTTCTCATTCCTCCAACTTCCTCCCCTCCTTCAATTATTTTTTTGTAAAGTTGATGCCTTACTT ss_oligo DNA Experimental URN:LSID:smd.stanford.edu:geneSymbol:SLC7A8 SLC7A8 gene DNA HOP_57 H 1 865729 0 U U
481 1 1 1 17 hSQ043339 Homo sapiens 44.29 70 76 TTCCAATGGAAATTATAGCCAGCTGCAGTTCCAAGCTAGAGAGTATTCTGGAGCACCTTATTCCCAAAGG ss_oligo DNA Experimental URN:LSID:smd.stanford.edu:locus:65981 65981 gene DNA HOP_61 D 1 867169 0 U U
511 1 1 1 18 hSQ034167 Homo sapiens 67.14 70 85 GTTCTACAGCTATGGCCGGGCCAGCTGCAGCTTTCCGCCGCTTGGGCGCCTTGTCCGGAGCTGCGGCCTT ss_oligo DNA Experimental URN:LSID:smd.stanford.edu:geneSymbol:C17orf61 C17orf61 gene DNA HOP_64 P 1 868609 0 U U
541 1 1 1 19 hSQ012282 Homo sapiens 70.00 70 86 CACCCTGCCCAGCTCAGGGATTGGCGGGCGATGTTACCCCCTCAGGGATTGGCGGGCGGAAGTCCCGCCC ss_oligo DNA Experimental URN:LSID:smd.stanford.edu:geneSymbol:NBEAL2 NBEAL2 gene DNA HOP_68 L 1 870049 0 U U
571 1 1 1 20 hSQ026304 Homo sapiens 35.71 70 72 GCATGTAGATGGTTGTGCAATATTTTTCAAAAGAGAAAAATTTACATTGGTGCAGAAGCATGCAGTGGAA ss_oligo DNA Experimental URN:LSID:smd.stanford.edu:geneSymbol:LOC440280 LOC440280 gene DNA HOP_72 H 1 871489 0 U U

Total number of rows: 49152

Table truncated, full table size 11855 Kbytes.




Download family Format
SOFT formatted family file(s) SOFTHelp
MINiML formatted family file(s) MINiMLHelp

Supplementary file Size Download File type/resource
GPL6697.adf.gz 3.6 Mb (ftp)(http) ADF

| NLM | NIH | GEO Help | Disclaimer | Accessibility |
NCBI Home NCBI Search NCBI SiteMap