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GEO help: Mouse over screen elements for information. |
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| Status |
Public on May 21, 2009 |
| Title |
UPR-DevNeuro H.glaberrima_regenearation 8x15K v1.1 (Agilent custom) |
| Technology type |
spotted oligonucleotide |
| Distribution |
custom-commercial |
| Organism |
Holothuria glaberrima |
| Manufacturer |
Agilent |
| Manufacture protocol |
Two-Color Microarray-Based Gene Expression Analysis. Agilent (manual part #: G4140-90050)
|
| Support |
Glass slide. |
| Coating |
Phosphoramidite |
| |
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| |
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| Web link |
http://devneuro.hpcf.upr.edu
|
| Contributor(s) |
Ortiz-Pineda PA, Garcia-Arraras JE, Ramirez-Gomez FJ |
| Submission date |
May 20, 2009 |
| Last update date |
Oct 25, 2011 |
| Contact name |
Pablo Andres Ortiz-Pineda |
| Organization name |
University of Massachusetts
|
| Department |
Veterinary & Animal Sciences
|
| Lab |
ISB 455
|
| Street address |
661 N Pleasant st
|
| City |
Amherts |
| State/province |
MA |
| ZIP/Postal code |
01002 |
| Country |
USA |
| |
|
| Samples (16)
|
GSM406321, GSM406322, GSM406323, GSM406324, GSM406325, GSM406326
|
| Series (1) |
| GSE16182 |
Gene expression profile of regenerating intestine in the sea cucumber H. glaberrima |
|
| Data table header descriptions |
| ID |
|
| chr_coord |
chromosome |
| SEQUENCE |
sequence |
| ProbeName |
agilent probe name |
| GeneName |
agilent gene name |
| SystematicName |
agilent systematic name |
| Description |
description |
| SPOT_ID |
spot identifier |
| Data table |
| ID |
chr_coord |
SEQUENCE |
ProbeName |
GeneName |
SystematicName |
Description |
SPOT_ID |
| 1 |
|
|
GE_BrightCorner |
GE_BrightCorner |
GE_BrightCorner |
|
GE_BrightCorner |
| 2 |
|
|
DarkCorner |
DarkCorner |
DarkCorner |
|
DarkCorner |
| 3 |
|
|
DarkCorner |
DarkCorner |
DarkCorner |
|
DarkCorner |
| 4 |
unmapped |
TGATCCACCTGCTATCCAGTGGCTCACCATGGATTGATGTCTAAATCTGTCATCACATCA |
CUST_11773_PI378611823 |
CUST_11773_PI378611823 |
CUST_11773_PI378611823 |
Unknown |
CUST_11773_PI378611823 |
| 5 |
unmapped |
CTCCAAGCAGACTGGCTGACTGGGGATGTATGAAAAAACTCAACAGTATCATAAATTTTT |
CUST_1206_PI378625531 |
CUST_1206_PI378625531 |
CUST_1206_PI378625531 |
Unknown |
CUST_1206_PI378625531 |
| 6 |
unmapped |
TGAATAATTCTCGGGAAGCCTTTGACAGACTTTCTTTACATTGGATACTTTTAACCTTCC |
CUST_1110_PI378611823 |
CUST_1110_PI378611823 |
CUST_1110_PI378611823 |
Unknown |
CUST_1110_PI378611823 |
| 7 |
unmapped |
GGATGACTAGGAAGCTGTGAATCATGATTTGAAAGTGTTGAAGCTTGTATTTGAATATGT |
CUST_3184_PI378611823 |
CUST_3184_PI378611823 |
CUST_3184_PI378611823 |
Unknown |
CUST_3184_PI378611823 |
| 8 |
unmapped |
TGTTCAGTACAATTGCCAGAGACCAACCTGGGAATTATTCACTAAATCTTTGGGATTAAG |
CUST_3449_PI378611823 |
CUST_3449_PI378611823 |
CUST_3449_PI378611823 |
Unknown |
CUST_3449_PI378611823 |
| 9 |
unmapped |
TTCTATTTTTATTCCTAATATGAGAAGCTTACGCCTCCCAGCGAGAAGTTCCCACACCTT |
CUST_12794_PI378611823 |
CUST_12794_PI378611823 |
CUST_12794_PI378611823 |
Unknown |
CUST_12794_PI378611823 |
| 10 |
unmapped |
CCAATACACTTGTGTTGTAATATCTCATTTACCAAAATTGCACTTGTGAAGTGCGAGTAG |
CUST_253_PI378611823 |
CUST_253_PI378611823 |
CUST_253_PI378611823 |
Unknown |
CUST_253_PI378611823 |
| 11 |
unmapped |
TTCTAGACCACAGGCTTTAAAGACATTTATATGAGATGTCTGGGATAATTCACCCCATAT |
CUST_514_PI378611823 |
CUST_514_PI378611823 |
CUST_514_PI378611823 |
Unknown |
CUST_514_PI378611823 |
| 12 |
unmapped |
CAGTTTGTTGCAAGCCTGCTTCAAATTAACGAAGACTAAATAAAATCATCTTCCACTGTC |
CUST_9294_PI378611823 |
CUST_9294_PI378611823 |
CUST_9294_PI378611823 |
Unknown |
CUST_9294_PI378611823 |
| 13 |
unmapped |
CCCCAGCTGTTTCTAGTAGTTAACTTAAAATCGTTCATCCTATCGGAGCTAATAGTAATC |
CUST_488_PI378611823 |
CUST_488_PI378611823 |
CUST_488_PI378611823 |
Unknown |
CUST_488_PI378611823 |
| 14 |
unmapped |
TTGAAGAGGATCAGATGATGTATGCCTCTGTAGAGTGGGGACTTGACAGAATTGACCAGA |
CUST_1509_PI378611823 |
CUST_1509_PI378611823 |
CUST_1509_PI378611823 |
Unknown |
CUST_1509_PI378611823 |
| 15 |
unmapped |
CAGAGACAGTGTATGGATCAAAGTGGCAGTTTCTGCCAAAAATTTTACATTTAGTATCAA |
CUST_535_PI378625531 |
CUST_535_PI378625531 |
CUST_535_PI378625531 |
Unknown |
CUST_535_PI378625531 |
| 16 |
unmapped |
CCCTTTTGATAAAGTTGCTTGTGGAAAGTCTTTCGGTACACCAGATGGAACTGAAAATTC |
CUST_1270_PI378611823 |
CUST_1270_PI378611823 |
CUST_1270_PI378611823 |
Unknown |
CUST_1270_PI378611823 |
| 17 |
unmapped |
TAGGTTTGAATTAAATGGGGTCAGGTCCTCTTGCGAGCATTTTGGAGGTGTTAGGAGAAC |
CUST_13221_PI378611823 |
CUST_13221_PI378611823 |
CUST_13221_PI378611823 |
Unknown |
CUST_13221_PI378611823 |
| 18 |
unmapped |
CCTTCCAAAAAATGTTCGCCTCCCCTAGAAAGTTTCAAGTTGCTATTGTCTAATCCATTT |
CUST_5017_PI378611823 |
CUST_5017_PI378611823 |
CUST_5017_PI378611823 |
Unknown |
CUST_5017_PI378611823 |
| 19 |
unmapped |
ACCCGTTTTAGCAGGAGCAATCACAATGCTCTTAACCGACCGAAATATAAAAACGACTTT |
CUST_4210_PI378611823 |
CUST_4210_PI378611823 |
CUST_4210_PI378611823 |
Unknown |
CUST_4210_PI378611823 |
| 20 |
unmapped |
CGAAAGGACCGGAAAATCCCTGTTAATAGGCAACCTCAAAAAGGAAATTGAAACCTAAAT |
CUST_6947_PI378611823 |
CUST_6947_PI378611823 |
CUST_6947_PI378611823 |
Unknown |
CUST_6947_PI378611823 |
Total number of rows: 15744
Table truncated, full table size 2577 Kbytes.
| Supplementary data files not provided |
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