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Status
Public on Apr 18, 2010
Title
Agilent-014950 Human Genome CGH Microarray 4x44K (Probe Name version)
Technology type
in situ oligonucleotide
Distribution
commercial
Organism
Homo sapiens Manufacturer
Agilent Technologies
Manufacture protocol
see manufacturer's web site (www.agilent.com)
Description
Agilent-014950 Human Genome CGH Microarray 4x44K
Submission date
Jul 10, 2009
Last update date
Jun 20, 2013
Organization
Agilent Technologies
E-mail(s)
[email protected] Phone
877-424-4536
URL
http://www.agilent.com Department
Street address
City
Palo Alto
State/province
CA
ZIP/Postal code
94304
Country
USA
Samples (790)
GSM426557 , GSM426558 , GSM426559 , GSM426560 , GSM426561 , GSM426562
GSM426563 ,
GSM426564 ,
GSM426565 ,
GSM426566 ,
GSM426567 ,
GSM426568 ,
GSM426569 ,
GSM426570 ,
GSM426571 ,
GSM426572 ,
GSM426573 ,
GSM426574 ,
GSM426575 ,
GSM426576 ,
GSM426577 ,
GSM426578 ,
GSM426579 ,
GSM426580 ,
GSM426581 ,
GSM426582 ,
GSM426583 ,
GSM426584 ,
GSM426585 ,
GSM426586 ,
GSM426587 ,
GSM426588 ,
GSM426589 ,
GSM426590 ,
GSM426591 ,
GSM426592 ,
GSM426593 ,
GSM426594 ,
GSM429662 ,
GSM429674 ,
GSM429676 ,
GSM429687 ,
GSM429688 ,
GSM429691 ,
GSM429695 ,
GSM429697 ,
GSM429698 ,
GSM429699 ,
GSM580047 ,
GSM580048 ,
GSM580049 ,
GSM580050 ,
GSM580051 ,
GSM580052 ,
GSM580054 ,
GSM580055 ,
GSM580056 ,
GSM580057 ,
GSM580058 ,
GSM580059 ,
GSM580060 ,
GSM580061 ,
GSM580062 ,
GSM580063 ,
GSM580064 ,
GSM580065 ,
GSM580066 ,
GSM580067 ,
GSM580068 ,
GSM580069 ,
GSM580070 ,
GSM580071 ,
GSM580072 ,
GSM580073 ,
GSM580074 ,
GSM580076 ,
GSM580077 ,
GSM580078 ,
GSM580079 ,
GSM580080 ,
GSM580081 ,
GSM580082 ,
GSM580083 ,
GSM580084 ,
GSM580085 ,
GSM580086 ,
GSM580087 ,
GSM580088 ,
GSM580089 ,
GSM580090 ,
GSM580091 ,
GSM580092 ,
GSM580093 ,
GSM580094 ,
GSM580095 ,
GSM580096 ,
GSM580098 ,
GSM580099 ,
GSM580100 ,
GSM580101 ,
GSM580104 ,
GSM580105 ,
GSM580106 ,
GSM580107 ,
GSM580108 ,
GSM580109 ,
GSM622248 ,
GSM622249 ,
GSM622250 ,
GSM622251 ,
GSM622252 ,
GSM622253 ,
GSM622254 ,
GSM622255 ,
GSM622256 ,
GSM622257 ,
GSM622258 ,
GSM622259 ,
GSM622260 ,
GSM622261 ,
GSM622262 ,
GSM622263 ,
GSM622264 ,
GSM622265 ,
GSM622266 ,
GSM622267 ,
GSM622268 ,
GSM622269 ,
GSM622270 ,
GSM622271 ,
GSM622272 ,
GSM659217 ,
GSM659218 ,
GSM659219 ,
GSM659220 ,
GSM659221 ,
GSM659222 ,
GSM659223 ,
GSM659224 ,
GSM659225 ,
GSM659226 ,
GSM659227 ,
GSM659228 ,
GSM659229 ,
GSM659230 ,
GSM659231 ,
GSM659232 ,
GSM659233 ,
GSM659234 ,
GSM659235 ,
GSM659236 ,
GSM659237 ,
GSM659238 ,
GSM659239 ,
GSM659240 ,
GSM659241 ,
GSM659242 ,
GSM659243 ,
GSM659244 ,
GSM659245 ,
GSM659246 ,
GSM659247 ,
GSM659248 ,
GSM659249 ,
GSM659250 ,
GSM659251 ,
GSM659252 ,
GSM659253 ,
GSM659254 ,
GSM659255 ,
GSM659256 ,
GSM659257 ,
GSM659258 ,
GSM659259 ,
GSM659260 ,
GSM659261 ,
GSM659262 ,
GSM659263 ,
GSM659264 ,
GSM659265 ,
GSM659266 ,
GSM659267 ,
GSM659268 ,
GSM659269 ,
GSM659270 ,
GSM659271 ,
GSM659272 ,
GSM659273 ,
GSM659274 ,
GSM659275 ,
GSM802678 ,
GSM802679 ,
GSM802680 ,
GSM802681 ,
GSM802682 ,
GSM802683 ,
GSM802684 ,
GSM802685 ,
GSM802686 ,
GSM802687 ,
GSM802688 ,
GSM802689 ,
GSM802690 ,
GSM802691 ,
GSM820352 ,
GSM820353 ,
GSM820354 ,
GSM820355 ,
GSM820356 ,
GSM820357 ,
GSM820358 ,
GSM820359 ,
GSM820360 ,
GSM820361 ,
GSM820362 ,
GSM820363 ,
GSM820364 ,
GSM820365 ,
GSM820366 ,
GSM820367 ,
GSM820368 ,
GSM820369 ,
GSM820370 ,
GSM849821 ,
GSM849822 ,
GSM849823 ,
GSM849824 ,
GSM849825 ,
GSM849826 ,
GSM849827 ,
GSM849828 ,
GSM849829 ,
GSM849830 ,
GSM849831 ,
GSM849832 ,
GSM849833 ,
GSM849834 ,
GSM849835 ,
GSM849836 ,
GSM1026856 ,
GSM1026857 ,
GSM1026858 ,
GSM1026859 ,
GSM1026860 ,
GSM1038811 ,
GSM1038812 ,
GSM1038813 ,
GSM1038814 ,
GSM1038815 ,
GSM1038816 ,
GSM1038817 ,
GSM1038818 ,
GSM1038819 ,
GSM1038820 ,
GSM1038821 ,
GSM1038822 ,
GSM1038823 ,
GSM1038824 ,
GSM1038825 ,
GSM1038826 ,
GSM1038827 ,
GSM1038828 ,
GSM1038829 ,
GSM1038830 ,
GSM1038831 ,
GSM1038832 ,
GSM1038833 ,
GSM1038834 ,
GSM1038835 ,
GSM1038836 ,
GSM1038837 ,
GSM1038838 ,
GSM1038839 ,
GSM1038840 ,
GSM1038841 ,
GSM1038842 ,
GSM1038843 ,
GSM1038844 ,
GSM1038845 ,
GSM1038846 ,
GSM1038847 ,
GSM1038848 ,
GSM1038849 ,
GSM1057115 ,
GSM1057116 ,
GSM1057117 ,
GSM1057118 ,
GSM1057119 ,
GSM1057120 ,
GSM1057121 ,
GSM1057122 ,
GSM1057123 ,
GSM1057124 ,
GSM1057125 ,
GSM1057126 ,
GSM1057127 ,
GSM1057128 ,
GSM1057129 ,
GSM1057130 ,
GSM1057131 ,
GSM1057132 ,
GSM1057133 ,
GSM1057134 ,
GSM1057135 ,
GSM1057136 ,
GSM1057137 ,
GSM1057138 ,
GSM1057139 ,
GSM1057140 ,
GSM1057141 ,
GSM1057142 ,
GSM1057143 ,
GSM1057144 ,
GSM1057145 ,
GSM1057146 ,
GSM1057147 ,
GSM1057148 ,
GSM1057149 ,
GSM1057150 ,
GSM1057151 ,
GSM1057152 ,
GSM1057153 ,
GSM1057154 ,
GSM1057155 ,
GSM1057156 ,
GSM1057157 ,
GSM1057158 ,
GSM1057159 ,
GSM1057160 ,
GSM1057161 ,
GSM1057162 ,
GSM1057163 ,
GSM1057164 ,
GSM1057165 ,
GSM1057166 ,
GSM1057167 ,
GSM1057168 ,
GSM1057169 ,
GSM1057170 ,
GSM1057171 ,
GSM1057172 ,
GSM1057173 ,
GSM1057174 ,
GSM1057175 ,
GSM1057176 ,
GSM1057177 ,
GSM1057178 ,
GSM1057179 ,
GSM1057180 ,
GSM1057181 ,
GSM1057182 ,
GSM1057183 ,
GSM1057184 ,
GSM1057185 ,
GSM1057186 ,
GSM1057187 ,
GSM1057188 ,
GSM1057189 ,
GSM1057190 ,
GSM1057191 ,
GSM1057192 ,
GSM1057193 ,
GSM1057194 ,
GSM1057195 ,
GSM1057196 ,
GSM1057197 ,
GSM1057198 ,
GSM1057199 ,
GSM1057200 ,
GSM1057201 ,
GSM1057202 ,
GSM1057203 ,
GSM1057204 ,
GSM1057205 ,
GSM1057206 ,
GSM1057207 ,
GSM1057208 ,
GSM1057209 ,
GSM1057210 ,
GSM1057211 ,
GSM1057212 ,
GSM1057213 ,
GSM1057214 ,
GSM1063436 ,
GSM1063437 ,
GSM1063438 ,
GSM1063439 ,
GSM1063440 ,
GSM1063441 ,
GSM1063442 ,
GSM1063443 ,
GSM1063444 ,
GSM1063445 ,
GSM1063446 ,
GSM1063447 ,
GSM1063448 ,
GSM1063449 ,
GSM1063450 ,
GSM1063451 ,
GSM1063452 ,
GSM1063453 ,
GSM1063454 ,
GSM1063455 ,
GSM1063456 ,
GSM1063457 ,
GSM1063458 ,
GSM1063459 ,
GSM1063460 ,
GSM1063461 ,
GSM1063462 ,
GSM1063463 ,
GSM1063464 ,
GSM1063465 ,
GSM1063466 ,
GSM1063467 ,
GSM1063468 ,
GSM1063469 ,
GSM1063470 ,
GSM1063471 ,
GSM1063472 ,
GSM1063473 ,
GSM1063474 ,
GSM1063475 ,
GSM1063476 ,
GSM1063477 ,
GSM1063478 ,
GSM1063479 ,
GSM1063480 ,
GSM1063481 ,
GSM1063482 ,
GSM1063483 ,
GSM1063484 ,
GSM1063485 ,
GSM1063486 ,
GSM1063487 ,
GSM1063488 ,
GSM1063489 ,
GSM1063490 ,
GSM1063491 ,
GSM1063492 ,
GSM1063493 ,
GSM1063494 ,
GSM1063495 ,
GSM1063496 ,
GSM1063497 ,
GSM1063498 ,
GSM1063499 ,
GSM1063500 ,
GSM1063501 ,
GSM1063502 ,
GSM1063503 ,
GSM1063504 ,
GSM1063505 ,
GSM1082762 ,
GSM1082763 ,
GSM1082764 ,
GSM1082765 ,
GSM1082766 ,
GSM1082767 ,
GSM1082768 ,
GSM1082769 ,
GSM1082770 ,
GSM1082771 ,
GSM1082772 ,
GSM1082773 ,
GSM1082774 ,
GSM1082775 ,
GSM1082776 ,
GSM1082777 ,
GSM1082778 ,
GSM1082779 ,
GSM1082780 ,
GSM1082781 ,
GSM1082782 ,
GSM1082783 ,
GSM1082784 ,
GSM1082785 ,
GSM1082786 ,
GSM1082787 ,
GSM1082788 ,
GSM1082789 ,
GSM1082790 ,
GSM1082791 ,
GSM1082792 ,
GSM1082793 ,
GSM1082794 ,
GSM1082795 ,
GSM1082796 ,
GSM1082797 ,
GSM1082798 ,
GSM1082799 ,
GSM1082800 ,
GSM1082801 ,
GSM1082802 ,
GSM1100764 ,
GSM1100765 ,
GSM1100766 ,
GSM1100767 ,
GSM1100768 ,
GSM1100769 ...
Accession list truncated, click here to browse through all related public accessions You can also download a list of all accessions here Series (29)
GSE17047 Candidate driver genes in focal chromosomal aberrations of stage II colon cancer
GSE17181 Deletion of chromosome 4q predicts outcome in Stage II colon cancer
GSE23644 DNA copy number alterations in endobronchial squamous metaplastic lesions predict lung cancer
GSE25298 Genomic aberrations in primary central nervous system lymphoma (PCNSL)
GSE25299 Genomic profiling combined with gene expression profiling in primary central nervous system lymphoma
GSE26800 Intratumoral genomic heterogeneity in submucosal-invasive gastric cancer
GSE27574 High-resolution analysis of copy number changes in circulating and disseminated tumor cells in breast cancer patients
GSE32233 Molecular characterization of Nodal marginal zone lymphoma
GSE32436 Molecular characterization of Nodal marginal zone lymphoma [CGH]
GSE33117 Genomic profiling of 19 renal cell carcinoma samples from patients with end-stage renal disease
GSE34472 Human rectal adenoma (8 cases) vs. rectal carcinoma (8 cases)
GSE41875 Genome variation profiling of Glioma Stem Cell lines
GSE43131 Genomic copy number aberrations in primary lung squamous cell carcinoma
GSE43477 Genomic profiling of primary and metastatic clear cell renal cell carcinoma by array-based comparative genomic hybridization.
GSE44300 DNA profiling of human normal colon tissues
GSE45287 DNA copy number profiles of premalignant endobronchial lesions: a validated predictor for endobronchial cancer
GSE45573 Genomic signatures predict poor outcome in Undifferentiated Pleomorphic Sarcomas and Leiomyosarcomas
GSE46452 Human esophageal dysplasia (16 cases) vs. esophageal squamous cell carcinoma (59 cases)
GSE47985 Induced Pluripotent Stem Cells From Pancreatic Ductal Adenocarcinoma Can Recapitulate Early Developmental Stages of Cancer
GSE50134 Recurrent copy number alterations are associated with poor prognosis and HPV infection in penile carcinomas
GSE52641 Genomic profiling of chromophobe renal cell carcinoma by array-based comparative genomic hybridization
GSE57899 Application of array-CGH for the detection of genomic rearrangements responsible for syndromic mental retardation of unknown cause
GSE62439 Application of CGH-array for the detection of genomic rearrangements responsible for sindromic mental retardation of unknown cause
GSE62440 Application of CGH-array and SNP-array for the detection of genomic rearrangements responsible for sindromic mental retardation of unknown cause
GSE62779 Genomic Screening of Testicular Germ Cell Tumors from Monozygotic Twins
GSE65175 Genomic profiling of pancreatic cancer cell lines by array-based comparative genomic hybridization
GSE70541 Hereditary Breast Cancer Tumors
GSE87058 Genome-wide copy number analysis by Array CGH for the analysis of clonality of thoracic tumors
GSE164743 Common chromosomal aberrations detected by array comparative genomic hybridization in bladder cancer
Relations Alternative to
GPL5477
Data table header descriptions ID CONTROL_TYPE GB_ACC GenBankAccession
GENE_SYMBOL GENE_NAME ACCESSION_STRING CHROMOSOMAL_LOCATION Chromosomal Location
CYTOBAND DESCRIPTION
Data table ID CONTROL_TYPE GB_ACC GENE_SYMBOL GENE_NAME ACCESSION_STRING CHROMOSOMAL_LOCATION CYTOBAND DESCRIPTION A_14_P100000
FALSE
NM_019027 RBM47
RNA binding motif protein 47
ref|NM_019027|ref|NM_001098634
chr4:40513326-40513385
hs|p14
Homo sapiens RNA binding motif protein 47 (RBM47), transcript variant 2, mRNA.
A_14_P100001
FALSE
NM_032888 COL27A1
collagen, type XXVII, alpha 1
ref|NM_032888
chr9:116980545-116980592
hs|q32
Homo sapiens collagen, type XXVII, alpha 1 (COL27A1), mRNA.
A_14_P100002
FALSE
chr18:14928795-14928854
hs|p11.21
A_14_P100003
FALSE
NM_001146261 SYT14
synaptotagmin XIV
ref|NM_001146261|ref|NM_001146262|ref|NM_001146264|ref|NM_153262|ref|NR_027458|ref|NR_027459
chr1:210112939-210112998
hs|q32.2
Homo sapiens synaptotagmin XIV (SYT14), transcript variant 1, mRNA.
A_14_P100004
FALSE
NM_006737 KIR3DL2
killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2
ref|NM_006737
chr19:55377895-55377945
hs|q13.42
Homo sapiens killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2 (KIR3DL2), mRNA.
A_14_P100005
FALSE
ens|ENST00000285670
chr21:15954441-15954495
hs|q11.2
A_14_P100006
FALSE
chr7:54758083-54758142
hs|p11.2
A_14_P100007
FALSE
NM_012263 TTLL1
tubulin tyrosine ligase-like family, member 1
ref|NM_012263|ref|NR_027779
chr22:43437396-43437455
hs|q13.2
Homo sapiens tubulin tyrosine ligase-like family, member 1 (TTLL1), transcript variant 1, mRNA.
A_14_P100008
FALSE
NM_001134364 MAP4
microtubule-associated protein 4
ref|NM_001134364|ref|NM_002375|ref|NM_030885
chr3:48094781-48094840
hs|p21.31
Homo sapiens microtubule-associated protein 4 (MAP4), transcript variant 4, mRNA.
A_14_P100009
FALSE
NM_020344 SLC24A2
solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
ref|NM_020344
chr9:19646699-19646758
hs|p22.1
Homo sapiens solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 (SLC24A2), mRNA.
A_14_P100010
FALSE
NM_031471 FERMT3
fermitin family homolog 3 (Drosophila)
ref|NM_031471|ref|NM_178443
chr11:63990225-63990281
hs|q13.1
Homo sapiens fermitin family homolog 3 (Drosophila) (FERMT3), transcript variant URP2SF, mRNA.
A_14_P100011
FALSE
chr1:38831122-38831181
hs|p34.3
A_14_P100012
FALSE
NM_015576 ERC2
ELKS/RAB6-interacting/CAST family member 2
ref|NM_015576
chr3:56235973-56236032
hs|p14.3
Homo sapiens ELKS/RAB6-interacting/CAST family member 2 (ERC2), mRNA.
A_14_P100013
FALSE
AK302867 gb|AK302867
chr3:49142491-49142547
hs|p21.31
Homo sapiens cDNA FLJ55601 complete cds, highly similar to Glutaminyl-tRNA synthetase (EC 6.1.1.18).
A_14_P100014
FALSE
NM_001098515 MRGPRF
MAS-related GPR, member F
ref|NM_001098515|ref|NM_145015
chr11:68771883-68771942
hs|q13.3
Homo sapiens MAS-related GPR, member F (MRGPRF), transcript variant 1, mRNA.
A_14_P100015
FALSE
NM_014012 REM1
RAS (RAD and GEM)-like GTP-binding 1
ref|NM_014012
chr20:30072443-30072500
hs|q11.21
Homo sapiens RAS (RAD and GEM)-like GTP-binding 1 (REM1), mRNA.
A_14_P100016
FALSE
NM_001135242 NDRG1
N-myc downstream regulated 1
ref|NM_001135242|ref|NM_006096
chr8:134297983-134298042
hs|q24.22
Homo sapiens N-myc downstream regulated 1 (NDRG1), transcript variant 1, mRNA.
A_14_P100017
FALSE
NM_000305 PON2
paraoxonase 2
ref|NM_000305|ref|NM_001018161
chr7:95063827-95063886
hs|q21.3
Homo sapiens paraoxonase 2 (PON2), transcript variant 1, mRNA.
A_14_P100018
FALSE
NM_003908 EIF2S2
eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa
ref|NM_003908
chr20:32695583-32695642
hs|q11.22
Homo sapiens eukaryotic translation initiation factor 2, subunit 2 beta, 38kDa (EIF2S2), mRNA.
A_14_P100019
FALSE
ens|ENST00000445967
chr13:86740559-86740618
hs|q31.1
43307 7487 Kbytes .Supplementary data files not provided
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