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| Status |
Public on Jun 16, 2020 |
| Title |
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring (Melanoma Datasets) |
| Organism |
Homo sapiens |
| Experiment type |
Expression profiling by array
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| Summary |
Development of a cost-effective and practical targeted transcriptional fingerprinting assay (TFA) for monitoring a diverse repertoire of immune responses identified in the human blood transcriptome relying on a modular transcriptional repertoire built on the basis of variations in transcript abundance measured on a genome wide scale in the blood of nearly 1000 subjects across 16 immunologic conditions.
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| Overall design |
Melanoma Stage IV (22 condition, 5 control, 27 total)
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| Contributor(s) |
Altman MC, Baldwin N, Khaenam P, Gersuk VH, Chiche L, Jourde-Chiche N, Phillips JT, Klintmalm G, O’Garra A, Berry M, Bloom C, Lipman M, Wilkinson R, Graham C, Lertmemongkolchai G, Conley ME, Skinner J, Kheradmand F, Linsley PS, Palucka K, Lukaszewski RA, Mejias A, Ramilo O, Pascual V, Banchereau J, Quinn C, Presnell S, Whalen E, Chaussabel D |
| Citation(s) |
33377660, 32736569, 34282143, 37845713 |
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| Submission date |
Jun 19, 2017 |
| Last update date |
Oct 26, 2023 |
| Contact name |
Nicole Baldwin |
| E-mail(s) |
[email protected]
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| Organization name |
Baylor Research Institute
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| Street address |
3434 Live Oak St
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| City |
Dallas |
| ZIP/Postal code |
75204 |
| Country |
USA |
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| Platforms (1) |
| GPL6884 |
Illumina HumanWG-6 v3.0 expression beadchip |
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| Samples (27)
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| GSM2672530 |
4710384022_L: whole blood-Melanoma-Control |
| GSM2672531 |
4710384022_K: whole blood-Melanoma-Control |
| GSM2672532 |
4710384024_B: whole blood-Melanoma-Control |
| GSM2672533 |
4710384028_G: whole blood-Melanoma-Control |
| GSM2672534 |
4710384024_A: whole blood-Melanoma-Control |
| GSM2672535 |
4710384030_I: whole blood-Melanoma-Melanoma |
| GSM2672536 |
4710384041_G: whole blood-Melanoma-Melanoma |
| GSM2672537 |
4710384036_H: whole blood-Melanoma-Melanoma |
| GSM2672538 |
4710384024_L: whole blood-Melanoma-Melanoma |
| GSM2672539 |
4710384042_L: whole blood-Melanoma-Melanoma |
| GSM2672540 |
4710384022_D: whole blood-Melanoma-Melanoma |
| GSM2672541 |
4710384028_L: whole blood-Melanoma-Melanoma |
| GSM2672542 |
4710384046_L: whole blood-Melanoma-Melanoma |
| GSM2672543 |
4710384041_F: whole blood-Melanoma-Melanoma |
| GSM2672544 |
4710384035_E: whole blood-Melanoma-Melanoma |
| GSM2672545 |
4710384042_C: whole blood-Melanoma-Melanoma |
| GSM2672546 |
4710384022_B: whole blood-Melanoma-Melanoma |
| GSM2672547 |
4710384046_F: whole blood-Melanoma-Melanoma |
| GSM2672548 |
4710384022_I: whole blood-Melanoma-Melanoma |
| GSM2672549 |
4710384040_L: whole blood-Melanoma-Melanoma |
| GSM2672550 |
4710384034_G: whole blood-Melanoma-Melanoma |
| GSM2672551 |
4710384041_H: whole blood-Melanoma-Melanoma |
| GSM2672552 |
4710384022_A: whole blood-Melanoma-Melanoma |
| GSM2672553 |
4710384028_F: whole blood-Melanoma-Melanoma |
| GSM2672554 |
4710384046_D: whole blood-Melanoma-Melanoma |
| GSM2672555 |
4710384022_H: whole blood-Melanoma-Melanoma |
| GSM2672556 |
4710384029_E: whole blood-Melanoma-Melanoma |
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| This SubSeries is part of SuperSeries: |
| GSE100150 |
A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring |
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| Relations |
| BioProject |
PRJNA391065 |
| Supplementary file |
Size |
Download |
File type/resource |
| GSE100158_Melanoma_non-normalized.txt.gz |
4.1 Mb |
(ftp)(http) |
TXT |
| GSE100158_Melanoma_normalized.txt.gz |
4.8 Mb |
(ftp)(http) |
TXT |
| GSE100158_RAW.tar |
6.3 Mb |
(http)(custom) |
TAR |
| Processed data included within Sample table |
| Processed data are available on Series record |
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